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Locus name | AT3G22370 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Redox regulation:Antioxidants |
Effect for Senescence | unclear |
Gene Description | alternative oxidase 1a, mitochondrial (AOX1A) identical to GB:Q39219 [SP|Q39219] from [Arabidopsis thaliana] |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Pathway | |
Sequence | AT3G22370.1 | Genomic | mRNA | CDS | Protein
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Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
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Details | | target: AT3G22370.1 miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -21.6 kcal/mol p-value: 0.025087
position: 172 target 5' A C U C C 3' CGGUC G A GGUUUCGUCUCA GUUAG U U CUAAAGUAGAGU miRNA 3' G U 5'
target: AT3G22370.1 miRNA: ath-miR834 miRNA: ath-miR834 mfe: -27.6 kcal/mol p-value: 0.012363
position: 986 target 5' C C G G 3' UGCU C GCUAUUGCUAUU AUGG G CGAUGACGAUGG miRNA 3' A U G U 5'
target: AT3G22370.1 miRNA: ath-miR870 miRNA: ath-miR870 mfe: -24.5 kcal/mol p-value: 0.022455
position: 519 target 5' A U U C 3' GAUC GAAGAAGCAUCA GUU CUAG CUUCUUUGUGGU UAA miRNA 3' U U 5'
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Ortholog Group | |
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Ortholog Groups: OG5_130283 | |
Cross Link | |
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Localization 1 | Localization | mitochondria | Evidence | Localization with GFP-fusion protein (GFP:cDNA) | Pubmed ID | 10737809 |
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Localization 2 | Localization | mitochondrion | Evidence | SUBAcon | Pubmed ID | 23180787 |
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