Basic information
Locus name	AT3G02875
Alias	ILR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:Auxin
Effect for Senescence	unclear
Gene Description	IAA-amino acid hydrolase 1 (ILR1) identical to IAA-amino acid hydrolase 1 (ILR1) [Arabidopsis thaliana] SWISS-PROT:P54968
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process metabolic process molecular function hydrolase activity
Sequence	AT3G02875.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_127543	Accession Taxon NP_175587 Arabidopsis thaliana NP_175589 Arabidopsis thaliana NP_186937 ( AT3G02875 ) Arabidopsis thaliana NP_200476 Arabidopsis thaliana NP_200477 Arabidopsis thaliana 105119 Chlamydomonas reinhardtii 123463 Chlamydomonas reinhardtii ACO60739 Micromonas sp. RCC299 ACO68130 Micromonas sp. RCC299 NP_001043347 Oryza sativa Japonica Group NP_001044020 Oryza sativa Japonica Group NP_001051828 Oryza sativa Japonica Group NP_001059293 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_04.0001000032 Ostreococcus tauri e_gw1.8029.3.1 Physcomitrella patens subsp. patens e_gw1.9535.2.1 Physcomitrella patens subsp. patens 29736.m002115 Ricinus communis 30032.m000453 Ricinus communis 30146.m003436 Ricinus communis estExt_thaps1_ua_kg.C_chr_100131 Thalassiosira pseudonana CCMP1335 XP_002949487 Volvox carteri f. nagariensis XP_002951617 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32404 3.8E-165 19 435 No hit NA PIRSF PIRSF005962 7.5E-141 31 431 IPR017439 Amidohydrolase SUPERFAMILY SSF53187 1.4E-81 47 233 No hit NA TIGRFAM TIGR01891 7.1E-128 52 415 IPR017439 Amidohydrolase Pfam PF01546 8.6E-30 110 423 IPR002933 Peptidase M20 SUPERFAMILY SSF55031 8.6E-30 217 336 IPR011650 Peptidase M20, dimerisation domain Pfam PF07687 1.4E-11 218 316 IPR011650 Peptidase M20, dimerisation domain SUPERFAMILY SSF53187 1.4E-81 338 428 No hit NA
Subcellular Localization
Localization	endoplasmic reticulum
Evidence	SUBAcon
Pubmed ID	23180787