Basic information   
Locus name AT1G64610
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categorySignal transduction:protein:protein interaction
Effect for Senescenceunclear
Gene DescriptionWD-40 repeat family protein contains Pfam PF00400: WD domain, G-beta repeat; similar to WD-repeat protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo sapiens]
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT1G64610.1 | Genomic | mRNA | CDS | Protein
AT1G64610.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_189896
AccessionTaxon
NP_176642Arabidopsis thaliana
NP_199016Arabidopsis thaliana
NP_974089 ( AT1G64610 ) Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR142213.0E-19669647No hitNA
SMARTSM003201.2E-9207246IPR001680WD40 repeat
SUPERFAMILYSSF509785.1E-53210249IPR017986WD40-repeat-containing domain
PfamPF004007.9E-11212246IPR001680WD40 repeat
ProSiteProfilesPS5008216.0214255IPR001680WD40 repeat
ProSiteProfilesPS5029419.3214400IPR017986WD40-repeat-containing domain
PRINTSPR003203.6E-6233247IPR020472G-protein beta WD-40 repeat
SMARTSM003204.9E-8311349IPR001680WD40 repeat
SUPERFAMILYSSF509785.1E-53312528IPR017986WD40-repeat-containing domain
PfamPF004001.1E-6313348IPR001680WD40 repeat
ProSiteProfilesPS5008211.8318358IPR001680WD40 repeat
PRINTSPR003203.6E-6336350IPR020472G-protein beta WD-40 repeat
SMARTSM003205.2E-11352391IPR001680WD40 repeat
PfamPF004008.4E-10354391IPR001680WD40 repeat
ProSiteProfilesPS5008213.4358392IPR001680WD40 repeat
PRINTSPR003203.6E-6378392IPR020472G-protein beta WD-40 repeat
SMARTSM003206.5393432IPR001680WD40 repeat
SMARTSM00320150.0437485IPR001680WD40 repeat
SMARTSM003200.0486525IPR001680WD40 repeat
ProSiteProfilesPS500828.8493525IPR001680WD40 repeat
PfamPF004000.0500525IPR001680WD40 repeat
SUPERFAMILYSSF509785.1E-53610638IPR017986WD40-repeat-containing domain