Basic information   
Locus name AT3G55470
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categorySignal transduction:Calcium
Effect for Senescenceunclear
Gene DescriptionC2 domain-containing protein similar to phloem protein GI:4164539 from [Cucurbita maxima]
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT3G55470.1 | Genomic | mRNA | CDS | Protein
AT3G55470.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_177334
AccessionTaxon
NP_001078296Arabidopsis thaliana
NP_191107 ( AT3G55470 ) Arabidopsis thaliana
NP_001044769Oryza sativa Japonica Group
27383.m000160Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR100246.3E-561141No hitNA
ProSiteProfilesPS5000415.3191IPR018029C2 membrane targeting protein
SUPERFAMILYSSF495623.4E-282133IPR008973C2 calcium/lipid-binding domain, CaLB
SMARTSM002397.7E-155106IPR000008C2 calcium-dependent membrane targeting
PfamPF001682.5E-19691IPR000008C2 calcium-dependent membrane targeting