Basic information   
Locus name AT4G01390
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categorySignal transduction
Effect for Senescenceunclear
Gene Descriptionmeprin and TRAF homology domain-containing protein / MATH domain-containing protein weak similarity to ubiquitin-specific protease 12 [Arabidopsis thaliana] GI:11993471; contains Pfam profile PF00917: MATH domain
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT4G01390.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_177710
AccessionTaxon
NP_180846Arabidopsis thaliana
NP_180847Arabidopsis thaliana
NP_192048 ( AT4G01390 ) Arabidopsis thaliana
NP_567187Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
ProSiteProfilesPS5014419.119143IPR002083MATH
SUPERFAMILYSSF495993.3E-2421146IPR008974TRAF-like
SMARTSM000610.024126IPR002083MATH
PfamPF009170.029141IPR002083MATH
ProSiteProfilesPS5014423.0165291IPR002083MATH
SUPERFAMILYSSF495992.9E-27165295IPR008974TRAF-like
SMARTSM000611.5E-14167275IPR002083MATH
PANTHERPTHR240061.1E-112172300No hitNA
PfamPF009174.1E-8175292IPR002083MATH
Subcellular Localization   
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787