Basic information   
Locus name AT4G20320
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryNucleic acid degradation
Effect for Senescenceunclear
Gene DescriptionCTP synthase, putative / UTP--ammonia ligase, putative similar to SP|P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
Pathway
KEGG
MetaCyc
Reactome
SequenceAT4G20320.1 | Genomic | mRNA | CDS | Protein
AT4G20320.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_126851
AccessionTaxon
NP_001078411 ( AT4G20320 ) Arabidopsis thaliana
NP_174368Arabidopsis thaliana
NP_181035Arabidopsis thaliana
NP_187873Arabidopsis thaliana
NP_192121Arabidopsis thaliana
NP_193765Arabidopsis thaliana
CMP216CCyanidioschyzon merolae strain 10D
176554Chlamydomonas reinhardtii
ACO68482Micromonas sp. RCC299
NP_001043581Oryza sativa Japonica Group
NP_001043745Oryza sativa Japonica Group
NP_001056365Oryza sativa Japonica Group
NP_001056382Oryza sativa Japonica Group
NP_001067005Oryza sativa Japonica Group
estExt_gwp_GeneWisePlus.C_Chr_01.00010360Ostreococcus tauri
estExt_Genewise1.C_1610051Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_1080086Physcomitrella patens subsp. patens
30076.m004688Ricinus communis
30162.m001257Ricinus communis
e_gw1.7.68.1Thalassiosira pseudonana CCMP1335
estExt_thaps1_ua_kg.C_chr_60175Thalassiosira pseudonana CCMP1335
XP_002958660Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
HamapMF_0122746.01550IPR004468CTP synthase
PANTHERPTHR115500.01554IPR004468CTP synthase
PfamPF064185.1E-1251284IPR017456CTP synthase, N-terminal
SUPERFAMILYSSF525407.4E-1211273IPR027417P-loop containing nucleoside triphosphate hydrolase
TIGRFAMTIGR003378.6E-2291545IPR004468CTP synthase
SUPERFAMILYSSF523174.1E-71298546No hitNA
ProSiteProfilesPS5127323.0299552IPR017926Glutamine amidotransferase
PfamPF001179.5E-59309544IPR017926Glutamine amidotransferase