Basic information   
Locus name AT2G41000
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:stress and detoxification
Effect for Senescenceunclear
Gene DescriptionDNAJ heat shock N-terminal domain-containing protein similar to SP|O75190 DnaJ homolog subfamily B member 6 (Heat shock protein J2) Homo sapiens; contains Pfam profile PF00226 DnaJ domain
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

SequenceAT2G41000.1 | Genomic | mRNA | CDS | Protein
AT2G41000.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_170208
AccessionTaxon
NP_001118491 ( AT2G41000 ) Arabidopsis thaliana
NP_181633Arabidopsis thaliana
NP_001042738Oryza sativa Japonica Group
gw1.48.46.1Physcomitrella patens subsp. patens
30106.m000659Ricinus communis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SUPERFAMILYSSF465658.1E-251106IPR001623DnaJ domain
SMARTSM002717.3E-27265IPR001623DnaJ domain
PANTHERPTHR240784.1E-20369No hitNA
PfamPF002261.0E-23370IPR001623DnaJ domain
ProSiteProfilesPS5007619.8373IPR001623DnaJ domain
PRINTSPR006251.1E-17523IPR001623DnaJ domain
PRINTSPR006251.1E-172338IPR001623DnaJ domain
PRINTSPR006251.1E-174565IPR001623DnaJ domain
ProSitePatternsPS00636NA5069IPR018253DnaJ domain, conserved site