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| Locus name | AT5G62480 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Others:stress and detoxification |
| Effect for Senescence | unclear |
| Gene Description | glutathione S-transferase, putative |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Gene Ontology | |
| Sequence | AT5G62480.1 | Genomic | mRNA | CDS | Protein
AT5G62480.2 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT5G62480.1
miRNA: ath-miR163
miRNA: ath-miR163
mfe: -27.9 kcal/mol
p-value: 0.005912
position: 678
target 5' G A A C U 3'
GUC AAG UCUAAGUCCUC UUA
UAG UUC AGGUUCAGGAG AGU
miRNA 3' C A A U 5'
target: AT5G62480.2
miRNA: ath-miR163
miRNA: ath-miR163
mfe: -27.9 kcal/mol
p-value: 0.004811
position: 573
target 5' G A A C U 3'
GUC AAG UCUAAGUCCUC UUA
UAG UUC AGGUUCAGGAG AGU
miRNA 3' C A A U 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_187823 | |
| Cross Link | |
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| Localization | cytosol |
| Evidence | SUBAcon |
| Pubmed ID | 23180787 |
