Basic information
Locus name	AT2G29420
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:stress and detoxification
Effect for Senescence	unclear
Gene Description	glutathione S-transferase, putative
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	molecular function protein binding
Sequence	AT2G29420.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
miRNA Interaction
Details	target: AT2G29420.1  miRNA: ath-miR319a miRNA: ath-miR319a mfe: -29.4 kcal/mol  p-value: 0.005609  position:  74  target 5' U   C               G  G 3'             GGG GAG UCCUUUUAGUC GA              UCC CUC AGGGAAGUCAG UU   miRNA  3'         G           G    5'  target: AT2G29420.1  miRNA: ath-miR319b miRNA: ath-miR319b mfe: -29.4 kcal/mol  p-value: 0.008690  position:  74  target 5' U   C               G  G 3'             GGG GAG UCCUUUUAGUC GA              UCC CUC AGGGAAGUCAG UU   miRNA  3'         G           G    5'  target: AT2G29420.1  miRNA: ath-miR865-5p miRNA: ath-miR865-5p mfe: -21.2 kcal/mol  p-value: 0.018583  position:  177  target 5' U       A            A 3'             UCAAUUG AUCCG GUUCAU              AGUUAAU UAGGU UAAGUA   miRNA  3' G       C     U        5'
Ortholog Group
Ortholog Groups: OG5_139472	Accession Taxon NP_180503 ( AT2G29420 ) Arabidopsis thaliana NP_180505 Arabidopsis thaliana NP_180506 Arabidopsis thaliana NP_180507 Arabidopsis thaliana NP_180508 Arabidopsis thaliana NP_180509 Arabidopsis thaliana NP_180510 Arabidopsis thaliana NP_187538 Arabidopsis thaliana 29751.m001835 Ricinus communis 29751.m001836 Ricinus communis 29751.m001837 Ricinus communis 29751.m001838 Ricinus communis 29751.m001839 Ricinus communis 29751.m001840 Ricinus communis 29751.m001841 Ricinus communis 29751.m001843 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11260 5.1E-91 2 224 No hit NA ProSiteProfiles PS50404 21.3 8 87 IPR004045 Glutathione S-transferase, N-terminal SUPERFAMILY SSF52833 2.9E-25 10 111 IPR012336 Thioredoxin-like fold Pfam PF13417 5.0E-18 12 84 No hit NA SUPERFAMILY SSF47616 7.5E-37 81 222 IPR010987 Glutathione S-transferase, C-terminal-like ProSiteProfiles PS50405 18.9 92 215 IPR017933 Glutathione S-transferase/chloride channel, C-terminal Pfam PF00043 4.4E-10 122 195 IPR004046 Glutathione S-transferase, C-terminal
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787