Basic information   
Locus name AT1G53580
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers:stress and detoxification
Effect for Senescenceunclear
Gene Descriptionhydroxyacylglutathione hydrolase, putative / glyoxalase II, putative similar to glyoxalase II GI:1644427 from (Arabidopsis thaliana)
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
molecular function
SequenceAT1G53580.1 | Genomic | mRNA | CDS | Protein
AT1G53580.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_127147
AccessionTaxon
NP_564636 ( AT1G53580 ) Arabidopsis thaliana
NP_974018Arabidopsis thaliana
ACO61469Micromonas sp. RCC299
ACO65526Micromonas sp. RCC299
NP_001043807Oryza sativa Japonica Group
estExt_genewise1.C_Chr_10.00010298Ostreococcus tauri
e_gw1.29.99.1Physcomitrella patens subsp. patens
e_gw1.99.55.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_460062Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_11137000001Physcomitrella patens subsp. patens
29993.m001038Ricinus communis
estExt_Genewise1.C_chr_220067Thalassiosira pseudonana CCMP1335
gw1.2.553.1Thalassiosira pseudonana CCMP1335
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR119353.1E-18742291No hitNA
PANTHERPTHR119357.1E-18642291No hitNA
SUPERFAMILYSSF562816.2E-4660281No hitNA
SUPERFAMILYSSF562811.8E-4560281No hitNA
PfamPF007533.8E-2063232IPR001279Beta-lactamase-like
PfamPF007533.8E-2063232IPR001279Beta-lactamase-like
SMARTSM008492.3E-2263232IPR001279Beta-lactamase-like
SMARTSM008492.3E-2263232IPR001279Beta-lactamase-like
Subcellular Localization   
Localizationmitochondrion
EvidenceSUBAcon
Pubmed ID23180787