Basic information   
Locus name AT3G13672
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene Descriptionseven in absentia (SINA) family protein low similarity to SP|P21461 Developmental protein seven in absentia {Drosophila melanogaster}; contains Pfam profile PF03145: Seven in absentia protein family
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
cellular component
Pathway
KEGG
SequenceAT3G13672.1 | Genomic | mRNA | CDS | Protein
AT3G13672.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_212374
AccessionTaxon
NP_187978Arabidopsis thaliana
NP_974306 ( AT3G13672 ) Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PfamPF031455.8E-855209IPR018121Seven-in-absentia protein, TRAF-like domain
SUPERFAMILYSSF495999.2E-3733211IPR008974TRAF-like
PANTHERPTHR103151.3E-6041216IPR004162Seven-in-absentia protein, sina