Basic information
Locus name	AT1G48260
Alias	CIPK17
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:protein kinase and phosphatases
Effect for Senescence	unclear
Gene Description	CBL-interacting protein kinase 17 (CIPK17)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process protein phosphorylation signal transduction molecular function ATP binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT1G48260.1 | Genomic | mRNA | CDS | Protein
Microarray
Sampling	Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4)
Comparation	Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group
Ortholog Groups: OG5_155486	Accession Taxon NP_175260 ( AT1G48260 ) Arabidopsis thaliana NP_566580 Arabidopsis thaliana NP_974328 Arabidopsis thaliana NP_001042792 Oryza sativa Japonica Group NP_001054578 Oryza sativa Japonica Group NP_001060397 Oryza sativa Japonica Group 29889.m003400 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24343 4.4E-169 4 299 No hit NA SUPERFAMILY SSF56112 1.7E-89 8 284 IPR011009 Protein kinase-like domain Pfam PF00069 5.8E-71 11 266 IPR000719 Protein kinase, catalytic domain ProSiteProfiles PS50011 47.9 11 266 IPR000719 Protein kinase, catalytic domain SMART SM00220 1.2E-101 11 266 IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain ProSitePatterns PS00107 NA 17 40 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 130 142 IPR008271 Serine/threonine-protein kinase, active site ProSiteProfiles PS50816 12.2 301 325 IPR018451 NAF/FISL domain Pfam PF03822 3.5E-19 302 362 IPR004041 NAF domain