Basic information
GenBank ID	AF454957
Alias	BoCP2
Organism	Broccoli (Brassica oleracea)
Taxonomic identifier	[NCBI]
Function category	Macromolecule degradation
Effect for Senescence	unclear
Gene Description	The mRNAs encoded by the broccoli cDNAs are expressed in floret tissue during harvest-induced senescence with mRNA accumulating within 6 h of harvest for BoCP1, 12 h of harvest for BoCP4 and within 24 h of harvest for BoCP2 and BoCP3.
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Coupe SA, Sinclair BK, Watson LM, Heyes JA, Eason JR Identification of dehydration-responsive cysteine proteases during post-harvest senescence of broccoli florets. J. Exp. Bot. 2003 Mar;54(384):1045-56
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	AF454957.1 | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 1.8E-243 6 460 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 1.3E-112 42 352 No hit NA Pfam PF08246 6.1E-17 49 109 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 8.1E-21 49 109 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 1.0E-86 137 352 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 3.6E-130 137 352 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.1E-10 155 170 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 155 166 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 295 305 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 1.1E-10 297 307 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 1.1E-10 312 318 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 312 331 IPR025661 Cysteine peptidase, asparagine active site SUPERFAMILY SSF57277 3.4E-12 372 406 No hit NA SMART SM00277 7.9E-22 375 430 IPR000118 Granulin Pfam PF00396 2.2E-9 386 430 IPR000118 Granulin