Basic information
GenBank ID	AF454958
Alias	BoCP3
Organism	Broccoli (Brassica oleracea)
Taxonomic identifier	[NCBI]
Function category	Macromolecule degradation
Effect for Senescence	unclear
Gene Description	The mRNAs encoded by the broccoli cDNAs are expressed in floret tissue during harvest-induced senescence with mRNA accumulating within 6 h of harvest for BoCP1, 12 h of harvest for BoCP4 and within 24 h of harvest for BoCP2 and BoCP3.
Evidence	Molecular evidence:Northern [Ref 1]
References	1: Coupe SA, Sinclair BK, Watson LM, Heyes JA, Eason JR Identification of dehydration-responsive cysteine proteases during post-harvest senescence of broccoli florets. J. Exp. Bot. 2003 Mar;54(384):1045-56
Gene Ontology	biological process proteolysis molecular function cysteine-type peptidase activity
Sequence	AF454958.1 | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12411 4.7E-240 1 428 IPR013128 Peptidase C1A, papain SUPERFAMILY SSF54001 2.8E-113 41 347 No hit NA Pfam PF08246 1.9E-15 48 104 IPR013201 Proteinase inhibitor I29, cathepsin propeptide SMART SM00848 8.9E-25 48 104 IPR013201 Proteinase inhibitor I29, cathepsin propeptide Pfam PF00112 1.0E-85 132 347 IPR000668 Peptidase C1A, papain C-terminal SMART SM00645 1.7E-126 132 347 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 8.4E-11 150 165 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00139 NA 150 161 IPR000169 Cysteine peptidase, cysteine active site ProSitePatterns PS00639 NA 290 300 IPR025660 Cysteine peptidase, histidine active site PRINTS PR00705 8.4E-11 292 302 IPR000668 Peptidase C1A, papain C-terminal PRINTS PR00705 8.4E-11 307 313 IPR000668 Peptidase C1A, papain C-terminal ProSitePatterns PS00640 NA 307 326 IPR025661 Cysteine peptidase, asparagine active site SUPERFAMILY SSF57277 5.5E-12 367 401 No hit NA SMART SM00277 5.4E-29 370 427 IPR000118 Granulin Pfam PF00396 2.0E-12 381 428 IPR000118 Granulin