| Title | Single-cell samples in CQUTGH |
|---|---|
| Description | Tumor growth cannot flourish without the oxygen and nutrients supplied by the blood, making angiogenesis induction one of the most critical cancer hallmarks. We generated scRNA-seq data from cancer patients to investigate tumor-infiltrating vascular cells across multiple cancer types. By integrating in-house and public single-cell datasets, we performed in silico sorting of ~200,000 vascular cells, including vascular endothelial cells (ECs), lymphatic ECs (LECs), and mural cells (MCs). Our findings contributed to understanding the tumor angiogenesis processes, LEC lineages, MC phenotypes, and intercellular interactions associated with the tumor vascular microenvironment (TVM). |
| Organism | Homo sapiens |
| Data Type | Expression Profiling |
| Data Accessibility | Controlled-access |
| BioProject | PRJCA018695 |
| Release Date | 2024-07-01 |
| Submitter | Mingzhu Yin (yinmingzhu2008@126.com) |
| Organization | Chongqing University Three Gorges Hospital |
| Submission Date | 2023-08-02 |
HTTP download speed may be slow. It is highly recommended that you download the dataset using a dedicated FTP tool (such as FileZilla Client).
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download |
|---|---|---|---|---|---|---|
| OMIX004666-05 | HSCR-10-0090-01.tar.gz | 1 | Expression Profiling | 17.65 MB | tar.gz | Controlled |
| OMIX004666-06 | HSCR-02-0119-01.tar.gz | 1 | Expression Profiling | 22.78 MB | tar.gz | Controlled |
| OMIX004666-07 | HSCR-02-0121-04.tar.gz | 1 | Expression Profiling | 19.35 MB | tar.gz | Controlled |
| OMIX004666-08 | HSCR-11-0016-01.tar.gz | 1 | Expression Profiling | 29.57 MB | tar.gz | Controlled |
| OMIX004666-09 | HSCR-11-0023-01.tar.gz | 1 | Expression Profiling | 22.81 MB | tar.gz | Controlled |
| OMIX004666-10 | HSCR-10-0091-05.tar.gz | 1 | Expression Profiling | 37.06 MB | tar.gz | Controlled |
| OMIX004666-11 | HSCR-02-0121-01.tar.gz | 1 | Expression Profiling | 53.87 MB | tar.gz | Controlled |
| OMIX004666-12 | HSCR-01-0107-02.tar.gz | 1 | Expression Profiling | 53.47 MB | tar.gz | Controlled |
| OMIX004666-13 | HSCR-01-0084-03.tar.gz | 1 | Expression Profiling | 9.7 MB | tar.gz | Controlled |
| OMIX004666-14 | HSCR-11-0020-02.tar.gz | 1 | Expression Profiling | 13.02 MB | tar.gz | Controlled |
| OMIX004666-15 | HSCR-01-0083-03.tar.gz | 1 | Expression Profiling | 14.82 MB | tar.gz | Controlled |
| OMIX004666-16 | HSCR-13-0029-01.tar.gz | 1 | Expression Profiling | 2.73 MB | tar.gz | Controlled |
| OMIX004666-17 | HSCR-09-0099-01.tar.gz | 1 | Expression Profiling | 8.89 MB | tar.gz | Controlled |
| OMIX004666-18 | HSCR-01-0108-02.tar.gz | 1 | Expression Profiling | 52.59 MB | tar.gz | Controlled |
| OMIX004666-19 | HSCR-02-0124-01.tar.gz | 1 | Expression Profiling | 10.14 MB | tar.gz | Controlled |
| OMIX004666-20 | HSCR-02-0127-01.tar.gz | 1 | Expression Profiling | 12.17 MB | tar.gz | Controlled |
| OMIX004666-21 | HSCR-12-0116-01.tar.gz | 1 | Expression Profiling | 31.08 MB | tar.gz | Controlled |
| OMIX004666-22 | HSCR-02-0128-04.tar.gz | 1 | Expression Profiling | 11.26 MB | tar.gz | Controlled |
| OMIX004666-23 | HSCR-03-0002-01.tar.gz | 1 | Expression Profiling | 9.47 MB | tar.gz | Controlled |
| OMIX004666-24 | HSCR-11-0014-01.tar.gz | 1 | Expression Profiling | 24.87 MB | tar.gz | Controlled |
| OMIX004666-25 | HSCR-11-0011-01.tar.gz | 1 | Expression Profiling | 34.51 MB | tar.gz | Controlled |
| OMIX004666-26 | HSCR-10-0096-01.tar.gz | 1 | Expression Profiling | 75.68 MB | tar.gz | Controlled |
| OMIX004666-27 | HSCR-10-0091-01.tar.gz | 1 | Expression Profiling | 37.06 MB | tar.gz | Controlled |
| OMIX004666-28 | HSCR-10-0090-03.tar.gz | 1 | Expression Profiling | 17.65 MB | tar.gz | Controlled |
| OMIX004666-29 | HSCR-01-0081-01.tar.gz | 1 | Expression Profiling | 36.21 MB | tar.gz | Controlled |
| OMIX004666-30 | HSCR-01-0082-01.tar.gz | 1 | Expression Profiling | 28.79 MB | tar.gz | Controlled |
| OMIX004666-31 | HSCR-01-0083-01.tar.gz | 1 | Expression Profiling | 16.16 MB | tar.gz | Controlled |
| OMIX004666-32 | HSCR-01-0084-01.tar.gz | 1 | Expression Profiling | 54.26 MB | tar.gz | Controlled |
| OMIX004666-33 | HSCR-01-0085-03.tar.gz | 1 | Expression Profiling | 24.65 MB | tar.gz | Controlled |
| OMIX004666-34 | HSCR-01-0085-01.tar.gz | 1 | Expression Profiling | 57.39 MB | tar.gz | Controlled |
| OMIX004666-35 | HSCR-01-0086-03.tar.gz | 1 | Expression Profiling | 5.13 MB | tar.gz | Controlled |
| OMIX004666-36 | HSCR-01-0086-01.tar.gz | 1 | Expression Profiling | 70.94 MB | tar.gz | Controlled |
| OMIX004666-37 | HSCR-01-0095-04.tar.gz | 1 | Expression Profiling | 5.63 MB | tar.gz | Controlled |
| OMIX004666-38 | HSCR-01-0095-03.tar.gz | 1 | Expression Profiling | 39.45 MB | tar.gz | Controlled |
| OMIX004666-39 | HSCR-01-0095-01.tar.gz | 1 | Expression Profiling | 22.48 MB | tar.gz | Controlled |
| OMIX004666-40 | HSCR-01-0096-01.tar.gz | 1 | Expression Profiling | 75.68 MB | tar.gz | Controlled |
| OMIX004666-41 | HSCR-01-0100-02.tar.gz | 1 | Expression Profiling | 48.95 MB | tar.gz | Controlled |
| OMIX004666-42 | HSCR-01-0100-01.tar.gz | 1 | Expression Profiling | 79.44 MB | tar.gz | Controlled |
| OMIX004666-43 | HSCR-01-0102-02.tar.gz | 1 | Expression Profiling | 27.67 MB | tar.gz | Controlled |
| OMIX004666-44 | HSCR-01-0102-03.tar.gz | 1 | Expression Profiling | 6.72 MB | tar.gz | Controlled |
| OMIX004666-45 | HSCR-01-0102-01.tar.gz | 1 | Expression Profiling | 25.27 MB | tar.gz | Controlled |
| OMIX004666-46 | HSCR-01-0104-01.tar.gz | 1 | Expression Profiling | 29.5 MB | tar.gz | Controlled |
| OMIX004666-47 | HSCR-01-0105-02.tar.gz | 1 | Expression Profiling | 21.59 MB | tar.gz | Controlled |
| OMIX004666-48 | HSCR-01-0107-01.tar.gz | 1 | Expression Profiling | 78.48 MB | tar.gz | Controlled |
| OMIX004666-49 | HSCR-01-0108-01.tar.gz | 1 | Expression Profiling | 10.26 MB | tar.gz | Controlled |
| OMIX004666-50 | HSCR-02-0119-04.tar.gz | 1 | Expression Profiling | 29.83 MB | tar.gz | Controlled |
| OMIX004666-51 | HSCR-02-0120-04.tar.gz | 1 | Expression Profiling | 11.23 MB | tar.gz | Controlled |
| OMIX004666-52 | HSCR-02-0120-01.tar.gz | 1 | Expression Profiling | 28.79 MB | tar.gz | Controlled |
| OMIX004666-53 | HSCR-02-0123-03.tar.gz | 1 | Expression Profiling | 2.23 MB | tar.gz | Controlled |
| OMIX004666-54 | HSCR-02-0123-01.tar.gz | 1 | Expression Profiling | 8.15 MB | tar.gz | Controlled |
| OMIX004666-55 | HSCR-02-0126-03.tar.gz | 1 | Expression Profiling | 18.07 MB | tar.gz | Controlled |
| OMIX004666-56 | HSCR-02-0126-01.tar.gz | 1 | Expression Profiling | 16.25 MB | tar.gz | Controlled |
| OMIX004666-57 | HSCR-02-0128-01.tar.gz | 1 | Expression Profiling | 14.62 MB | tar.gz | Controlled |
| OMIX004666-58 | HSCR-03-0001-01.tar.gz | 1 | Expression Profiling | 45.62 MB | tar.gz | Controlled |
| OMIX004666-59 | HSCR-04-0111-01.tar.gz | 1 | Expression Profiling | 22.46 MB | tar.gz | Controlled |
| OMIX004666-60 | HSCR-04-0112-05.tar.gz | 1 | Expression Profiling | 60.33 MB | tar.gz | Controlled |
| OMIX004666-61 | HSCR-05-0007-03.tar.gz | 1 | Expression Profiling | 12.46 MB | tar.gz | Controlled |
| OMIX004666-62 | HSCR-05-0007-01.tar.gz | 1 | Expression Profiling | 23.08 MB | tar.gz | Controlled |
| OMIX004666-63 | HSCR-05-0008-01.tar.gz | 1 | Expression Profiling | 113.44 MB | tar.gz | Controlled |
| OMIX004666-64 | HSCR-06-0088-03.tar.gz | 1 | Expression Profiling | 6.64 MB | tar.gz | Controlled |
| OMIX004666-65 | HSCR-06-0088-01.tar.gz | 1 | Expression Profiling | 6.64 MB | tar.gz | Controlled |
| OMIX004666-66 | HSCR-07-0036-03.tar.gz | 1 | Expression Profiling | 40.9 MB | tar.gz | Controlled |
| OMIX004666-67 | HSCR-07-0037-03.tar.gz | 1 | Expression Profiling | 67.96 MB | tar.gz | Controlled |
| OMIX004666-68 | HSCR-07-0038-01.tar.gz | 1 | Expression Profiling | 40.86 MB | tar.gz | Controlled |
| OMIX004666-69 | HSCR-07-0039-01.tar.gz | 1 | Expression Profiling | 57.48 MB | tar.gz | Controlled |
| OMIX004666-70 | HSCR-08-0041-01.tar.gz | 1 | Expression Profiling | 12.01 MB | tar.gz | Controlled |
| OMIX004666-71 | HSCR-08-0063-01.tar.gz | 1 | Expression Profiling | 41.44 MB | tar.gz | Controlled |
| OMIX004666-72 | HSCR-08-0067-01.tar.gz | 1 | Expression Profiling | 40.81 MB | tar.gz | Controlled |
| OMIX004666-73 | HSCR-09-0078-01.tar.gz | 1 | Expression Profiling | 30.16 MB | tar.gz | Controlled |
| OMIX004666-74 | HSCR-09-0097-01.tar.gz | 1 | Expression Profiling | 35.22 MB | tar.gz | Controlled |
| OMIX004666-75 | HSCR-11-0010-01.tar.gz | 1 | Expression Profiling | 9.28 MB | tar.gz | Controlled |
| OMIX004666-76 | HSCR-11-0012-01.tar.gz | 1 | Expression Profiling | 9.05 MB | tar.gz | Controlled |
| OMIX004666-77 | HSCR-11-0013-01.tar.gz | 1 | Expression Profiling | 47.48 MB | tar.gz | Controlled |
| OMIX004666-78 | HSCR-11-0015-01.tar.gz | 1 | Expression Profiling | 19.62 MB | tar.gz | Controlled |
| OMIX004666-79 | HSCR-11-0019-03.tar.gz | 1 | Expression Profiling | 13.02 MB | tar.gz | Controlled |
| OMIX004666-80 | HSCR-11-0019-01.tar.gz | 1 | Expression Profiling | 13.77 MB | tar.gz | Controlled |
| OMIX004666-81 | HSCR-11-0020-03.tar.gz | 1 | Expression Profiling | 12.13 MB | tar.gz | Controlled |
| OMIX004666-82 | HSCR-11-0021-03.tar.gz | 1 | Expression Profiling | 9.07 MB | tar.gz | Controlled |
| OMIX004666-83 | HSCR-11-0021-01.tar.gz | 1 | Expression Profiling | 20.68 MB | tar.gz | Controlled |
| OMIX004666-84 | HSCR-11-0022-03.tar.gz | 1 | Expression Profiling | 15.77 MB | tar.gz | Controlled |
| OMIX004666-85 | HSCR-11-0022-01.tar.gz | 1 | Expression Profiling | 18.31 MB | tar.gz | Controlled |
| OMIX004666-86 | HSCR-11-0023-02.tar.gz | 1 | Expression Profiling | 23.42 MB | tar.gz | Controlled |
| OMIX004666-87 | HSCR-11-0025-01.tar.gz | 1 | Expression Profiling | 9.81 MB | tar.gz | Controlled |
| OMIX004666-88 | HSCR-11-0026-01.tar.gz | 1 | Expression Profiling | 5.62 MB | tar.gz | Controlled |
| OMIX004666-89 | HSCR-12-0113-01.tar.gz | 1 | Expression Profiling | 31.79 MB | tar.gz | Controlled |
| OMIX004666-90 | HSCR-12-0114-01.tar.gz | 1 | Expression Profiling | 19.23 MB | tar.gz | Controlled |
| OMIX004666-91 | HSCR-12-0115-01.tar.gz | 1 | Expression Profiling | 22.71 MB | tar.gz | Controlled |
| OMIX004666-92 | HSCR-12-0117-01.tar.gz | 1 | Expression Profiling | 42.44 MB | tar.gz | Controlled |
| OMIX004666-93 | HSCR-12-0118-01.tar.gz | 1 | Expression Profiling | 44.32 MB | tar.gz | Controlled |
| OMIX004666-94 | HSCR-13-0003-04.tar.gz | 1 | Expression Profiling | 11.35 MB | tar.gz | Controlled |
| OMIX004666-95 | HSCR-13-0003-03.tar.gz | 1 | Expression Profiling | 18.98 MB | tar.gz | Controlled |
| OMIX004666-96 | HSCR-13-0003-01.tar.gz | 1 | Expression Profiling | 29.6 MB | tar.gz | Controlled |
| OMIX004666-97 | HSCR-13-0027-01.tar.gz | 1 | Expression Profiling | 3.56 MB | tar.gz | Controlled |
| OMIX004666-98 | HSCR-13-0028-03.tar.gz | 1 | Expression Profiling | 970.54 KB | tar.gz | Controlled |
| OMIX004666-99 | HSCR-13-0028-01.tar.gz | 1 | Expression Profiling | 2.96 MB | tar.gz | Controlled |
| OMIX004666-100 | HSCR-13-0029-03.tar.gz | 1 | Expression Profiling | 3.99 MB | tar.gz | Controlled |
| OMIX004666-102 | MetaFile.csv | 1 | Expression Profiling | 15.4 KB | csv | Controlled |
| Paper Title | Journal Name | Publish Time | Accession | Citing Type |
|---|---|---|---|---|
| Integrative single‐cell analysis uncovers distinct tumour microenvironment ecotypes and immune evasion across skin cancers | Clinical and Translational Medicine | 2026-02 | OMIX006477 OMIX005799 OMIX004666 | Deposit |
| Interferon-responsive HEVs drive tumor tertiary lymphoid structure formation and predict immunotherapy response in nasopharyngeal carcinoma | Cell Reports Medicine | 2025-06 | OMIX005799 OMIX006477 OMIX004666 | Secondary use |