LOI1 - Plant Editosome Database - CNCB-NGDC

Summary

Editing Factor: LOI1
Synonym: LOVASTATIN INSENSITIVE 1; MEF11; MITOCHONDRIAL RNA EDITING FACTOR 11
Description: As a result of analysis of RNA editing of mitochondrial genes in loi1, a defect in RNA editing of three genes, nad4, ccb203 and cox3, was identified in loi1; Wild type (WT) treated with some respiration inhibitors mimicked the loi1 phenotype; HMG-CoA reductase activity of WT treated with lovastatin combined with antimycin A, an inhibitor of complex III in the respiratory chain, was higher than that of WT treated with only lovastatin, despite the lack of alteration of transcript or protein levels of HMGR; These results suggest that HMGR enzyme activity is regulated through the respiratory cytochrome pathway; LOI1 is predicted to localize in mitochondria and has the ability to bind single-stranded nucleic acids; The post-transcriptional regulation of mitochondrial RNA may be involved in isoprenoid biosynthesis in both the MVA and MEP pathways
Protein Family: Pentatricopeptide repeat (PPR) protein
Subclass: DYW
Physical Interaction: NA
Construct Structure: PLS-E-DYW
Gene ID & Species: AT4G14850 (Arabidopsis thaliana)
Edited Gene(s): nad4    ccmFn2    cox3    NA
Editing Type(s): C-to-U (9)    NA (4)
Publication(s): [1] The mitochondrial PPR protein LOVASTATIN INSENSITIVE 1 plays regulatory roles in cytosolic and plastidial isoprenoid biosynthesis through RNA editing, The Plant Journal, 2010. [doi:10.1111/j.1365-313X.2009.04082.x]
[2] Lovastatin insensitive 1, a Novel pentatricopeptide repeat protein, is a potential regulatory factor of isoprenoid biosynthesis in Arabidopsis, Plant Cell Physiol, 2007. [doi:10.1093/pcp/pcm005]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Nuclear Genome Organelle Genome Other Region Other Position Editing Type Codon Amino Acid Molecular Effect Experiment Details
Arabidopsis thaliana AT4G14850 Mitochondrion ccmFn2 344 CDS NA NA NA NA C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Col-0Loi1Promotor::Loi1/loi1-1Complementationloi1-1 is complemented by the introduction of the gene cassette of the LOI1 promoter::LOI1 geneNANASeedling2 weeksDirect Sequencing of PCR ProductsNAHighRestored19929879
Col-0loi1-1T-DNA InsertionT-DNA is inserted at site 542bpNALower sensitivity to lovastatin and clomazoneSeedling2 weeksDirect Sequencing of PCR Products0.00%UneditedAbsent19929879
Col-0WTControlControlNo mutantNormalSeedling2 weeksDirect Sequencing of PCR Products100.00%CompleteNone19929879
Arabidopsis thaliana AT4G14850 Mitochondrion cox3 422 CDS NA NA NA NA C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Col-0Loi1Promotor::Loi1/loi1-1Complementationloi1-1 is complemented by the introduction of the gene cassette of the LOI1 promoter::LOI1 geneNANASeedling2 weeksDirect Sequencing of PCR Products100.00%CompleteRestored19929879
Col-0loi1-1T-DNA InsertionT-DNA is inserted at site 542bpNALower sensitivity to lovastatin and clomazoneSeedling2 weeksDirect Sequencing of PCR Products0.00%UneditedAbsent19929879
Col-0WTControlControlNo mutantNormalSeedling2 weeksDirect Sequencing of PCR Products100.00%CompleteNone19929879
Arabidopsis thaliana AT4G14850 Mitochondrion NA NA NA NA NA NA NA NA NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Col-0WTControlControlNo mutantRoot elongation in WT plants grown with 300 nM lovastatin was strongly reducedRootNANANANANA17213228
Col-0loi1-1T-DNA insertionA T-DNA insertion was at +542bp in the first exon of the At4g14850 geneHomozygousThe root elongation of treated loi1-1 plants was less affectedRootNANANANANA17213228
Col-0loi1-2T-DNA insertionA T-DNA insertion was at +729bp in the first exon of the At4g14850 geneNAThe root elongation of treated loi1-2 plants was less affectedRootNANANANANA17213228
Col-035S:: LOI1 in loi1-1T-DNA insertionA T-DNA insertion was at +542bp in the first exon of the At4g14850 gene. A DNA fragment containing the first 39 amino acid residues of the LOI1 protein and five residues of the glycine linker was ampHomozygousRoot elongation in loi1-1(35S:: LOI1) plants grown with 300 nM lovastatin was strongly reducedRootNANANANANA17213228
Arabidopsis thaliana AT4G14850 Mitochondrion nad4 124 CDS NA NA NA NA C-to-U CUG=>UUG L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
Col-0Loi1Promotor::Loi1/loi1-1Complementationloi1-1 is complemented by the introduction of the gene cassette of the LOI1 promoter::LOI1 geneNANASeedling2 weeksDirect Sequencing of PCR Products100.00%CompleteRestored19929879
Col-0loi1-1T-DNA InsertionT-DNA is inserted at site 542bpNALower sensitivity to lovastatin and clomazoneSeedling2 weeksDirect Sequencing of PCR Products0.00%UneditedAbsent19929879
Col-0WTControlControlNo mutantNormalSeedling2 weeksDirect Sequencing of PCR Products100.00%CompleteNone19929879
Last update: Sep 2026 (version 2.0)