cox3 - Plant Editosome Database - CNCB-NGDC

Summary

Gene: cox3
Function: Cytochrome c oxidase
Species: 24
Editing Factors:31 (bCCP1, BLX, DEK40, DEK56, DYW2, DYW2A, DYW2B, EMP21, EMP5, GRP23, LOI1, Lon1, MEF11, MEF13, MEF21, MEF26, MEF37, MEF8, MORF1, MORF3, NUWA, OGR1, ORRM4, OTP90, PAP2, PCW1, PGN, POCO1, PPR278, PPR_77, SOP10)
Editing Types:
C-to-U (401)
U-to-C (9)
Editing Sites: 416 (C-to-U: 401   U-to-C: 9   NA: 6)
External Link: NCBI Gene
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid
Anomodon attenuatusMitochondrion1
C-to-U: 1
70502CDS+C-to-UCAA=>UAAQ=>TERM
Anomodon rugeliiMitochondrion1
C-to-U: 1
70580CDS+C-to-UCAA=>UAAQ=>TERM
Arabidopsis thalianaMitochondrion8
C-to-U: 8
218391
218524
218536
218590
218593
218692
218701
218882
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
CCU=>CUU
UCU=>UUU
UCU=>UUU
UCU=>UUU
CCU=>CUU
CCU=>CUU
UUC=>UUU
P=>S
P=>L
S=>F
S=>F
S=>F
P=>L
P=>L
F=>F
Asclepias syriacaMitochondrion1
NA: 1
213293-214090CDS+NANA=>NANA=>NA
Beta macrocarpaMitochondrion4
C-to-U: 4
213395
213469
213513
213647
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCU=>UUU
AUC=>AUU
CUA=>UUA
R=>W
S=>F
I=>I
L=>L
Beta vulgaris subsp. maritimaMitochondrion4
C-to-U: 4
213478
213552
213596
213730
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCU=>UUU
AUC=>AUU
CUA=>UUA
R=>W
S=>F
I=>I
L=>L
Beta vulgaris subsp. vulgarisMitochondrion4
C-to-U: 4
297608
297682
297726
297860
CDS
CDS
CDS
CDS
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
CGG=>UGG
UCU=>UUU
AUC=>AUU
CUA=>UUA
R=>W
S=>F
I=>I
L=>L
Brassica napusMitochondrion7
C-to-U: 7
96597
96730
96742
96796
96799
96898
96907
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
CCU=>CUU
UCU=>UUU
UCU=>UUU
UCU=>UUU
CCU=>CUU
CCU=>CUU
P=>S
P=>L
S=>F
S=>F
S=>F
P=>L
P=>L
Citrullus lanatusMitochondrion10
C-to-U: 10
68353
68462
68506
68521
68528
68531
68605
68630
68729
68971
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CUA=>YUA
CCU=>CUU
CUU=>UUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CGG=>UGG
CCU=>CUU
UCA=>UUA
CGG=>UGG
L=>L
P=>L
L=>F
R=>W
S=>F
S=>F
R=>W
P=>L
S=>L
R=>W
Cucurbita pepoMitochondrion6
C-to-U: 6
950467
950482
950489
950492
950566
950690
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CUU=>UUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CGG=>UGG
UCA=>UUA
L=>F
R=>W
S=>F
S=>F
R=>W
S=>L
Ginkgo bilobaMitochondrion33
C-to-U: 33
335219
335225
335321
335322
335335
335339
335418
335424
335427
335450
335459
335461
335462
335465
335472
335475
335483
335487
335516
335541
335574
335583
335585
335625
335658
335688
335726
335735
335763
335766
335799
335810
335814
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCG=>UCG
CCA=>UCA
CCA=>UCA
CCA=>CUA
UUC=>UUU
CGG=>UGG
UCU=>UUU
CCG=>CUG
UCC=>UUC
CUU=>UUU
CUC=>UUC
CUC=>CUU
CUU=>UUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CCU=>UCU
UCG=>UUG
CGG=>UGG
CCA=>CUA
CCU=>CUU
CCU=>CUU
CCA=>UCA
CCC=>CUC
UCA=>UUA
UCC=>UUC
CUC=>UUC
CCG=>UCG
UCC=>UUC
UCA=>UUA
ACA=>AUA
CAC=>UAC
UCA=>UUA
P=>S
P=>S
P=>S
P=>L
F=>F
R=>W
S=>F
P=>L
S=>F
L=>F
L=>F
L=>L
L=>F
R=>W
S=>F
S=>F
P=>S
S=>L
R=>W
P=>L
P=>L
P=>L
P=>S
P=>L
S=>L
S=>F
L=>F
P=>S
S=>F
S=>L
T=>I
H=>Y
S=>L
Hypnum imponensMitochondrion1
C-to-U: 1
70101CDS+C-to-UCAA=>UAAQ=>TERM
Lotus japonicusMitochondrion12
C-to-U: 12
299076
299086
299328
299427
299452
299526
299529
299536
299551
299577
299583
299595
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CGG=>UGG
UCA=>UUA
CCU=>CUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CGG=>UGG
CUU=>UUU
CCG=>CUG
UCU=>UUU
CCU=>CUU
P=>L
R=>W
S=>L
P=>L
R=>W
S=>F
S=>F
R=>W
L=>F
P=>L
S=>F
P=>L
Millettia pinnataMitochondrion9
C-to-U: 9
105897
105996
106021
106095
106098
106105
106120
106152
106164
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCU=>CUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CGG=>UGG
CUU=>UUU
UCU=>UUU
CCU=>CUU
S=>L
P=>L
R=>W
S=>F
S=>F
R=>W
L=>F
S=>F
P=>L
Nelumbo nuciferaMitochondrion18
C-to-U: 18
435469
435602
435614
435620
435646
435655
435661
435668
435671
435745
435770
435776
435779
435869
435884
435923
435959
436010
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
+
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>UCA
CCU=>CUU
UCU=>UUU
CCG=>CUG
CUU=>UUU
CUU=>UUU
CGG=>UGG
UCU=>UUU
UCU=>UUU
CGG=>UGG
CCU=>CUU
CCC=>CUC
CCU=>CUU
UCA=>UUA
UCC=>UUC
UCC=>UUC
UCC=>UUC
UCG=>UUG
P=>S
P=>L
S=>F
P=>L
L=>F
L=>F
R=>W
S=>F
S=>F
R=>W
P=>L
P=>L
P=>L
S=>L
S=>F
S=>F
S=>F
S=>L
Nothoceros aenigmaticusMitochondrion1
U-to-C: 1
169473CDS+U-to-CUAA=>CAATERM=>Q
Ophioglossum californicumMitochondrion30
C-to-U: 29
U-to-C: 1
168556
168579
168580
168647
168657
168667
168687
168715
168717
168718
168748
168799
168891
168896
168902
168916
168965
168975
169009
169016
169031
169050
169051
169057
169060
169063
169075
169183
169323
169326
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UUC=>UUU
UCC=>UUC
UAA=>CAA
UGC=>UGU
UCA=>UUA
GUC=>GUU
UCA=>UUA
UUC=>UUU
UCC=>UUC
ACU=>AUU
CCA=>CUA
UCC=>UCU
CCA=>UCA
CUA=>UUA
CCA=>CUA
CGG=>UGG
AUC=>AUU
UCC=>UUC
CGG=>UGG
CUU=>UUU
AUC=>AUU
ACC=>AUC
UCG=>UUG
CCU=>CUU
UCU=>UUU
CCU=>CUU
CCU=>CUU
NA=>NA
NA=>NA
S=>L
F=>F
S=>F
TERM=>Q
C=>C
S=>L
V=>V
S=>L
F=>F
S=>F
T=>I
P=>L
S=>S
P=>S
L=>L
P=>L
R=>W
I=>I
S=>F
R=>W
L=>F
I=>I
T=>I
S=>L
P=>L
S=>F
P=>L
P=>L
NA=>NA
NA=>NA
Oryza sativa Japonica GroupMitochondrion1
C-to-U: 1
17270CDS-C-to-UCGG=>UGGR=>W
Phaeoceros laevisMitochondrion1
U-to-C: 1
36780CDS+U-to-CUAA=>CAATERM=>Q
Phlegmariurus squarrosusMitochondrion2
NA: 2
236086-236712
237489-237659
CDS
CDS
-
-
NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Psilotum nudumMitochondrion22
C-to-U: 22
62714
62718
62719
62749
62775
62829
62882
63017
63127
63160
63178
63189
63220
63257
63288
63333
63339
63370
63568
63621
63625
63636
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
5'UTR
5'UTR
5'UTR
5'UTR
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUU
UCA=>UUA
CCA=>UCA
CGG=>UGG
UCC=>UUC
CCA=>CUA
UUC=>UUU
CUC=>CUU
CGG=>UGG
CCU=>UCU
CGG=>UGG
UCA=>UUA
CUG=>UUG
ACC=>ACU
CCA=>CUA
UCG=>UUG
UCA=>UUA
CCA=>UCA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
F=>F
S=>L
P=>S
R=>W
S=>F
P=>L
F=>F
L=>L
R=>W
P=>S
R=>W
S=>L
L=>L
T=>T
P=>L
S=>L
S=>L
P=>S
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Rhazya strictaMitochondrion8
C-to-U: 8
316268
316278
316466
316520
316610
316613
316718
316734
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-
-
-
-
-
-
-
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCA=>CUA
CGG=>UGG
UCC=>UUC
UCA=>UUA
CCU=>CUU
CCC=>CUC
UCU=>UUU
CUU=>UUU
P=>L
R=>W
S=>F
S=>L
P=>L
P=>L
S=>F
L=>F
Sanionia uncinataMitochondrion1
C-to-U: 1
69783CDS+C-to-UCAA=>UAAQ=>TERM
Species Organelle Editing Sites Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Sep 2026 (version 2.0)