Plant
Editosome
Database
Summary
| Editing Factor: | OTP72 |
| Synonym: | ORGANELLE TRANSCRIPT PROCESSING 72 |
| Description: | Encoding a pentatricopeptide repeat (PPR) protein involved in RNA editing in mitochondria |
| Protein Family: | PPR |
| Subclass: | E,E+ |
| Physical Interaction: | NA |
| Construct Structure: | PLS-E, NA |
| Gene ID & Species: | AT3G13880 (Arabidopsis thaliana) |
| Edited Gene(s): | rpl16 |
| Editing Type(s): | C-to-U (4) |
| Publication(s): |
[1] The Analysis of the Editing Defects in the Mutant Provides New Clues for the Prediction of RNA Targets of Arabidopsis E+-Class PPR Proteins., Plants (Basel, Switzerland), 2020. [PMID=32098170] [2] The E domains of pentatricopeptide repeat proteins from different organelles are not functionally equivalent for RNA editing., The Plant journal : for cell and molecular biology, 2013. [PMID=23521509] |
Editing Details
| Species | Gene ID | Organelle | Edited Gene | Position | Region | Nuclear Genome | Organelle Genome | Other Position Region | Other Position | Editing Type | Codon | Amino Acid | Molecular Effect | Experiment Details | ||||||||||||||||||||||||||||||||||||||||||||||||||
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| Arabidopsis thaliana | AT3G13880 | Mitochondrion | rpl16 | 440 | CDS | EnsemblGenomes (release 39) | BK010421 | NA | NA | C-to-U | NA=>NA | NA=>NA | NA |
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| Arabidopsis thaliana | AT3G13880 | Mitochondrion | rpl16 | NA | CDS | Arabidopsis Genome Initiative | NC_001284.2 | NA | NA | C-to-U | CCA=>CUA | P=>L | Recoding |
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Last update: Feb 2026
(version 2.0)