mat-r - Plant Editosome Database - BIG Data Center

Summary

Gene: mat-r
Function: Intron maturase
Species: 5
Editing Types:
C-to-U (162)
Editing Events: 162 (C-to-U: 162)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Beta macrocarpaMitochondrion9
C-to-U: 9
45383
45550
45683
45770
47036
47057
47077
47091
47144
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCU=>CUU
UAC=>UAU
CCA=>UCA
UCC=>UUC
UCG=>UUG
CCC=>CUC
CCA=>CUA
CCA=>CUA
CGC=>UGC
P=>L
Y=>Y
P=>S
S=>F
S=>L
P=>L
P=>L
P=>L
R=>C
Beta vulgaris subsp. maritimaMitochondrion9
C-to-U: 9
55762
55929
56062
56149
57415
57436
57456
57470
57523
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CGC=>UGC
CCC=>CUC
UCC=>UUC
UCG=>UUG
CCU=>CUU
CCA=>CUA
UAC=>UAU
CCA=>CUA
CCA=>UCA
R=>C
P=>L
S=>F
S=>L
P=>L
P=>L
Y=>Y
P=>L
P=>S
Beta vulgaris subsp. vulgarisMitochondrion9
C-to-U: 9
243957
244124
244257
244344
245610
245631
245651
245665
245718
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>CUC
CCA=>UCA
UAC=>UAU
UCG=>UUG
CCU=>CUU
CGC=>UGC
UCC=>UUC
CCA=>CUA
CCA=>CUA
P=>L
P=>S
Y=>Y
S=>L
P=>L
R=>C
S=>F
P=>L
P=>L
Zea mays subsp. maysMitochondrion45
C-to-U: 45
267862
267872
267882
267890
267982
268016
268037
268642
268643
269471
269472
269675
269681
269734
269750
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CCC=>UCC
UCG=>UUG
UCA=>UUA
CCC=>UUC
UCC=>UUC
CCC=>CUC
CUC=>CUU
UAC=>UAU
UCC=>UUC
GUC=>GUU
CCC=>CUU
CCC=>CUU
UCC=>UUC
CCC=>UCC
CCU=>CUU
CCA=>CUA
CCC=>UUC
CCC=>UUC
CCC=>CUU
CCC=>CUC
UCG=>UUG
UCA=>UUA
GUC=>GUU
CCC=>UUC
CCC=>CUU
CUC=>CUU
UAC=>UAU
UCC=>UUC
CCA=>CUA
UCA=>UUA
CCC=>UUC
UCC=>UUC
CCC=>UCC
CCU=>CUU
UCG=>UUG
UCC=>UUC
GUC=>GUU
CCC=>CUU
CCC=>CUC
UAC=>UAU
CCU=>CUU
CCA=>CUA
CCC=>UUC
CCC=>CUU
CUC=>CUU
P=>S
S=>L
S=>L
P=>F
S=>F
P=>L
L=>L
Y=>Y
S=>F
V=>V
P=>L
P=>L
S=>F
P=>S
P=>L
P=>L
P=>F
P=>F
P=>L
P=>L
S=>L
S=>L
V=>V
P=>F
P=>L
L=>L
Y=>Y
S=>F
P=>L
S=>L
P=>F
S=>F
P=>S
P=>L
S=>L
S=>F
V=>V
P=>L
P=>L
Y=>Y
P=>L
P=>L
P=>F
P=>L
L=>L
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)