Plant
Editosome
Database
Summary
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| atp1 | 3 | 253487 253610 253724 | CDS CDS CDS | - - - | mRNA mRNA mRNA | C-to-U C-to-U C-to-U | CCA=>CUA CCG=>CUG CCA=>CUA | P=>L P=>L P=>L |
| atp6 | 12 | 4430 4441 4484 4621 4663 4685 4688 4747 4886 5032 5111 5200 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CAA=>UAA ACA=>AUA CAU=>UAU UCA=>UUA UCA=>UUA CAU=>UAU CCU=>UCU UCA=>UUA CGU=>UGU UCA=>UUA CCA=>UCA ACG=>AUG | Q=>TERM T=>I H=>Y S=>L S=>L H=>Y P=>S S=>L R=>C S=>L P=>S T=>M |
| atp8 | 2 | 215191 215208 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | UCA=>UUA UUC=>UUU | S=>L F=>F |
| atp9 | 5 | 320202 320232 320278 320394 320405 | CDS CDS CDS CDS CDS | + + + + + | mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCA=>UUA AUC=>AUU UCA=>UUA CGA=>UGA | S=>L S=>L I=>I S=>L R=>TERM |
| ccmB | 30 | 75573 75597 75600 75615 75618 75655 75657 75662 75666 75675 75684 75702 75745 75763 75865 75883 75986 75988 75989 75990 75997 76009 76015 76020 76021 76041 76089 76098 76130 76141 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCG=>UUG UCG=>UUG UCU=>UUU UCG=>UUG UCA=>UUA CGU=>UGU UCU=>UUU ACC=>ACU UCA=>UUA UCA=>UUA UCA=>UUA UCG=>UUG CGU=>UGU CUG=>UUG CGU=>UGU CGG=>UGG CCC=>CCU CCC=>UCC CCC=>CCU CCC=>CUC CCU=>UCU CCU=>UCU CGG=>UGG CCG=>CUG CCG=>UCG UCA=>UUA UCG=>UUG CCA=>CUA AUC=>AUU CAU=>UAU | S=>L S=>L S=>F S=>L S=>L R=>C S=>F T=>T S=>L S=>L S=>L S=>L R=>C L=>L R=>C R=>W P=>P P=>S P=>P P=>L P=>S P=>S R=>W P=>L P=>S S=>L S=>L P=>L I=>I H=>Y |
| ccmFC | 13 | 353712 353786 353807 355474 355489 355570 355705 355725 355729 355757 355758 355830 355842 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGG=>UGG UCG=>UUG CCA=>CUA CGU=>UGU CGU=>UGU CGU=>UGU CUA=>UUA UCA=>UUA CCU=>UCU UCC=>UCU UCC=>UUC CCU=>CUU UCC=>UUC | R=>W S=>L P=>L R=>C R=>C R=>C L=>L S=>L P=>S S=>S S=>F P=>L S=>F |
| ccmFN | 23 | 358125 358194 358239 358257 358290 358308 358323 358340 358368 358835 358850 358862 358884 358922 358931 359079 359185 359355 359375 359382 359487 359540 359600 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCC=>UCC CUU=>UUU CGU=>UGU CGG=>UGG CGG=>UGG CGG=>UGG CAU=>UAU CCA=>CUA CGG=>UGG UCA=>UUA CCA=>CUA UCA=>UUA CGU=>UGU UCA=>UUA CCU=>CUU CUU=>UUU UUC=>UUU CUU=>UUU CCA=>CUA CGG=>UGG CCU=>UCU CCU=>CUU CCG=>CUG | P=>S L=>F R=>C R=>W R=>W R=>W H=>Y P=>L R=>W S=>L P=>L S=>L R=>C S=>L P=>L L=>F F=>F L=>F P=>L R=>W P=>S P=>L P=>L |
| cob | 13 | 367812 367891 368048 368064 368164 368293 368404 368558 368614 368647 368674 368686 368930 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | ACG=>AUG CCU=>UCU CUC=>CUU CCC=>CUC CCC=>UCC CUU=>UUU CAU=>UAU UAC=>UAU CGG=>UGG CAU=>UAU CAC=>UAC CUC=>UUC CCC=>CCU | T=>M P=>S L=>L P=>L P=>S L=>F H=>Y Y=>Y R=>W H=>Y H=>Y L=>F P=>P |
| cox2 | 9 | 36471 36494 36586 36712 38240 38258 38273 38378 38539 | CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CUC=>CUU UCA=>UUA CGG=>UGG CGG=>UGG ACG=>AUG CCA=>CUA UCA=>UUA UCA=>UUA CGG=>UGG | L=>L S=>L R=>W R=>W T=>M P=>L S=>L S=>L R=>W |
| cox3 | 4 | 213395 213469 213513 213647 | CDS CDS CDS CDS | - - - - | mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U | CGG=>UGG UCU=>UUU AUC=>AUU CUA=>UUA | R=>W S=>F I=>I L=>L |
| mat-r | 9 | 45383 45550 45683 45770 47036 47057 47077 47091 47144 | CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCC=>CUC CCA=>UCA CCA=>CUA UCG=>UUG UCC=>UUC CCU=>CUU CGC=>UGC UAC=>UAU CCA=>CUA | P=>L P=>S P=>L S=>L S=>F P=>L R=>C Y=>Y P=>L |
| nad1 | 20 | 286076 287552 287555 287562 287598 287599 290110 290275 290323 290373 290415 290416 44650 71998 72028 72147 72171 72183 72186 72192 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS NA NA NA NA NA NA NA | + + + + + + + + + + + + + - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCU=>UCU CCU=>UCU CGU=>UGU UCG=>UUG UCC=>UUC UCC=>UCU ACG=>AUG UCG=>UUG UCC=>UUC CGG=>UGG CCG=>UCG CCG=>CUG UCU=>UUU NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | P=>S P=>S R=>C S=>L S=>F S=>S T=>M S=>L S=>F R=>W P=>S P=>L S=>F NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad2 | 23 | 313312 315504 315644 315674 315678 315744 315774 315796 315843 315928 315962 317603 317606 317611 317612 41922 43123 43256 43261 43267 43294 43328 43397 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCC=>UUC UCU=>UUU CAU=>UAU CGU=>UGU ACU=>AUU UCA=>UUA UCA=>UUA GUC=>GUU UCG=>UUG UUC=>UUU CCA=>UCA UCA=>UUA UCC=>UUC CCA=>UCA CCA=>CUA UCC=>UUC CUU=>UUU UCA=>UUA CCU=>UCU CGC=>UGC CAU=>UAU CCU=>CUU UCG=>UUG | S=>F S=>F H=>Y R=>C T=>I S=>L S=>L V=>V S=>L F=>F P=>S S=>L S=>F P=>S P=>L S=>F L=>F S=>L P=>S R=>C H=>Y P=>L S=>L |
| nad3 | 12 | 179020 179054 179076 179077 179095 179223 179230 179262 179281 179290 179359 179364 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA AUC=>AUU CCA=>UCA CCA=>CUA CCA=>CUA CUU=>UUU CCG=>CUG CCU=>UCU CCG=>CUG UCU=>UUU UCG=>UUG CGG=>UGG | S=>L I=>I P=>S P=>L P=>L L=>F P=>L P=>S P=>L S=>F S=>L R=>W |
| nad4 | 19 | 195906 195911 195927 198458 198712 198803 200804 200816 200820 200877 200885 200891 200992 201056 201087 201095 201146 201179 201224 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - - - - - - - - - - - - - | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGC=>UGC CCG=>CUG CAC=>UAC CCA=>CUA UAC=>UAU CCG=>CUG CCA=>CUA UCC=>UUC CUU=>UUU CGU=>UGU UCU=>UUU ACA=>AUA GAC=>GAU UCU=>UUU CGG=>UGG CCU=>CUU UCG=>UUG ACU=>AUU UCU=>UUU | R=>C P=>L H=>Y P=>L Y=>Y P=>L P=>L S=>F L=>F R=>C S=>F T=>I D=>D S=>F R=>W P=>L S=>L T=>I S=>F |
| nad4L | 10 | 337168 337213 337221 337261 337276 337297 337324 337345 337363 337447 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | ACG=>AUG UCA=>UUA CGG=>UGG UCA=>UUA UCA=>UUA UCG=>UUG UCG=>UUG UCA=>UUA CCA=>CUA UCU=>UUU | T=>M S=>L R=>W S=>L S=>L S=>L S=>L S=>L P=>L S=>F |
| nad5 | 17 | 235519 235559 235561 235582 236849 236879 236909 91584 92509 92625 92641 92665 92815 92875 92980 92992 93102 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | - - - - - - - + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCG=>UUG CGU=>UGU UCU=>UUU UCA=>UUA CCC=>CUC UCA=>UUA ACC=>AUC CCG=>CUG CCG=>CUG CUU=>UUU CCA=>CUA UCU=>UUU UCG=>UUG GCC=>GUC UCG=>UUG UCA=>UUA CCA=>UCA | S=>L R=>C S=>F S=>L P=>L S=>L T=>I P=>L P=>L L=>F P=>L S=>F S=>L A=>V S=>L S=>L P=>S |
| nad6 | 11 | 382121 382183 382184 382185 382189 382190 382198 382241 382256 382286 382664 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCG=>CUG CCC=>UCC CCC=>CUC CCC=>CCU CCA=>UCA CCA=>CUA CGC=>UGC UCC=>UUC CCA=>CUA UCA=>UUA UCU=>UUU | P=>L P=>S P=>L P=>P P=>S P=>L R=>C S=>F P=>L S=>L S=>F |
| nad7 | 20 | 17792 19782 19789 19854 19873 19882 19983 20071 20116 20217 21361 23269 23287 23316 23400 23422 23431 23446 23467 23509 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA CAU=>UAU UCA=>UUA CGU=>UGU UCA=>UUA UCA=>UUA CCG=>UCG UCC=>UUC UCA=>UUA CCA=>UCA CGC=>UGC UCA=>UUA CCU=>CUU CCU=>UCU CGU=>UGU UCU=>UUU UCA=>UUA UCU=>UUU CCA=>CUA UCU=>UUU | S=>L H=>Y S=>L R=>C S=>L S=>L P=>S S=>F S=>L P=>S R=>C S=>L P=>L P=>S R=>C S=>F S=>L S=>F P=>L S=>F |
| nad9 | 5 | 162609 162630 162816 162845 162885 | CDS CDS CDS CDS CDS | + + + + + | mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U | UCU=>UUU CCA=>CUA CCG=>CUG CGG=>UGG UCC=>UUC | S=>F P=>L P=>L R=>W S=>F |
| Novel | 1 | 1-385220 | NA | + | Unanotated Transcript | NA | NA=>NA | NA=>NA |
| rpl5 | 5 | 370491 370840 370945 370950 370962 | CDS CDS CDS CDS CDS | - - - - - | mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U | CCG=>CUG CCG=>UCG CAC=>UAC CCG=>CUG CCG=>CUG | P=>L P=>S H=>Y P=>L P=>L |
| rps12 | 6 | 179491 179520 179524 179616 179689 179704 | CDS CDS CDS CDS CDS CDS | + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCG=>UUG CGC=>UGC CCG=>CUG CAC=>UAC UCG=>UUG UCC=>UUC | S=>L R=>C P=>L H=>Y S=>L S=>F |
| rps13 | 2 | 285415 285593 | CDS CDS | + + | mRNA mRNA | C-to-U C-to-U | UCA=>UUA AUC=>AUU | S=>L I=>I |
| rps3 | 5 | 187283 187484 187802 188135 188162 | CDS CDS CDS CDS CDS | + + + + + | mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCG=>UUG CCA=>CUA CCG=>CUG CCG=>CUG | S=>L S=>L P=>L P=>L P=>L |
| rps4 | 11 | 380588 380672 380732 380805 380874 381007 381021 381390 381441 381450 381455 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CGG=>UGG CCG=>UCG CAU=>UAU CCA=>CUA CCG=>CUG UUC=>UUU UCA=>UUA UCU=>UUU CCA=>CUA CCU=>CUU CGG=>UGG | R=>W P=>S H=>Y P=>L P=>L F=>F S=>L S=>F P=>L P=>L R=>W |
| rps7 | 3 | 33188 33404 33498 | NA NA NA | + + + | mRNA mRNA mRNA | C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)