rbcL - Plant Editosome Database - BIG Data Center

Summary

Gene: rbcL
Function: Rubisco
Species: 5
Editing Types:
C-to-U (27)
U-to-C (7)
Editing Events: 39 (C-to-U: 27   U-to-C: 7   NA: 5)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Anthoceros angustusChloroplast20
C-to-U: 13
U-to-C: 7
72981
73030
73032
73044
73213
73221
73309
73324
73396
73588
73735
73813
73814
73852
73864
73893
73926
73957
73959
74038
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
U-to-C
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
U-to-C
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
C-to-U
C-to-U
U-to-C
U-to-C
ACC=>AUC
UAA=>CAA
CAU=>UAU
UCU=>UUU
UCA=>UUA
CCA=>UCA
UCA=>UUA
AUU=>ACU
UCG=>UUG
UGU=>CGU
CCU=>CUU
UCU=>UUU
UGU=>CGU
UCA=>UUA
UCA=>UUA
CUC=>CCC
GCU=>GUU
ACC=>ACU
UGA=>CGA
UCU=>CCU
T=>I
TERM=>Q
H=>Y
S=>F
S=>L
P=>S
S=>L
I=>T
S=>L
C=>R
P=>L
S=>F
C=>R
S=>L
S=>L
L=>P
A=>V
T=>T
TERM=>R
S=>P
Isoetes flaccidaChloroplast1
NA: 1
31148-32575CDS-NANA=>NANA=>NA
Millettia pinnataChloroplast6
C-to-U: 6
5325
5514
5973
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UUC=>UUU
UUC=>UUU
AUC=>AUU
AUC=>AUU
UUC=>UUU
UUC=>UUU
F=>F
F=>F
I=>I
I=>I
F=>F
F=>F
Nothoceros aenigmaticusPlastid2
NA: 2
74793-76220NA
NA
+NA
NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Panicum virgatumChloroplast2
C-to-U: 2
56629
57277
CDS
CDS
NAC-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)