NOTE:

Genome & Gene:
Contains related genome sequences of all sub-species, gene annotation gff file and protein sequences.
Gene Group:
Contains gene matrix and corresponding gene sequences for each gene group.
Genomic Variations:
Contains 13 types of variations in vcf files.
Gene Functions:
Contains GO annotations, protein domain annotations of genes and those genes annotated as transcription factors, literature validated resistance, predicted microbial/disease resistance, metabolism related.
Graph Pan-Genome:
It refers to the graph-based pan-genome by integrating all genetics variations and reference genome. This can be downloaded for further analysis.
Genome Synteny:
Contains genome syntey information in vcf format.
Species Genome & Gene Gene Group Genomic Variations Gene Function Graph Pan-Genome Genome Synteny
Arabidopsis Thaliana at.genome.gene.tar.gz at.gene.group.tar.gz at.genetics.variation.tar.gz at.gene.function.tar.gz at.graph.pan-genome.tar.gz at.genome.synteny.tar.gz
Brassica Napus bn.genome.gene.tar.gz bn.gene.group.tar.gz bn.genetics.variation.tar.gz bn.gene.function.tar.gz bn.graph.pan-genome.tar.gz bn.genome.synteny.tar.gz
Brassica Rapa br.genome.gene.tar.gz br.gene.group.tar.gz br.genetics.variation.tar.gz br.gene.function.tar.gz br.graph.pan-genome.tar.gz br.genome.synteny.tar.gz
Maize ma.genome.gene.tar.gz ma.gene.group.tar.gz ma.genetics.variation.tar.gz ma.gene.function.tar.gz ma.graph.pan-genome.tar.gz ma.genome.synteny.tar.gz
Potato po.genome.gene.tar.gz po.gene.group.tar.gz po.genetics.variation.tar.gz po.gene.function.tar.gz po.graph.pan-genome.tar.gz po.genome.synteny.tar.gz
Raphanus Sativus ra.genome.gene.tar.gz ra.gene.group.tar.gz ra.genetics.variation.tar.gz ra.gene.function.tar.gz ra.graph.pan-genome.tar.gz ra.genome.synteny.tar.gz
Rice ri.genome.gene.tar.gz ri.gene.group.tar.gz ri.genetics.variation.tar.gz ri.gene.function.tar.gz ri.graph.pan-genome.tar.gz ri.genome.synteny.tar.gz
Sorghum sr.genome.gene.tar.gz sr.gene.group.tar.gz sr.genetics.variation.tar.gz sr.gene.function.tar.gz sr.graph.pan-genome.tar.gz sr.genome.synteny.tar.gz
Soybean sy.genome.gene.tar.gz sy.gene.group.tar.gz sy.genetics.variation.tar.gz sy.gene.function.tar.gz sy.graph.pan-genome.tar.gz sy.genome.synteny.tar.gz
Strawberry st.genome.gene.tar.gz st.gene.group.tar.gz st.genetics.variation.tar.gz st.gene.function.tar.gz st.graph.pan-genome.tar.gz st.genome.synteny.tar.gz
Tomato to.genome.gene.tar.gz to.gene.group.tar.gz to.genetics.variation.tar.gz to.gene.function.tar.gz to.graph.pan-genome.tar.gz to.genome.synteny.tar.gz