e.g., HRA000087; HRA000150
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HRA002939
Title:
Transcriptome analysis of Control and STAT3 knockdown in HepG2 cell lines
Release date:
2022-08-31
Description:
To investigate the effect of STAT3 knockdown on transcription, we constructed control and STAT3 knockdown HepG2 cell lines by shRNA. We then performed gene expression profiling using data obtained from RNA-seq
Data Accessibility:   
Open access
BioProject:
PRJCA011554
Study type:
Cell line related study
Dataset Download
MetaData:
HRA002939.xlsx
Files:
HTTPS：https://download.cncb.ac.cn/gsa-human/HRA002939
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FTP：ftp://download.big.ac.cn/gsa-human/HRA002939

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Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI274155HepG2maleHRS438224HepG2 Ctrlsh1Ctrl Knockdown by Ctrl shRNA
HRI274155HepG2maleHRS438225HepG2 Ctrlsh2Ctrl Knockdown by Ctrl shRNA
HRI274155HepG2maleHRS438226HepG2 Ctrlsh3Ctrl Knockdown by Ctrl shRNA
HRI274155HepG2maleHRS438227HepG2 STAT3sh1STAT3 Knockdown by STAT3 shRNA
HRI274155HepG2maleHRS438228HepG2 STAT3sh2STAT3 Knockdown by STAT4 shRNA
HRI274155HepG2maleHRS438229HepG2 STAT3sh3STAT3 Knockdown by STAT5 shRNA
Showing 1 to 6 of 6 rows rows per page
Files
Download
Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR743177HRR743177_f1.fq.gz (1.29 GB)HRX536989HepG2 Ctrlsh1Illumina NovaSeq 6000HRS438224 (SAMC2300473)
HRR743177HRR743177_r2.fq.gz (1.33 GB)HRX536989HepG2 Ctrlsh1Illumina NovaSeq 6000HRS438224 (SAMC2300473)
HRR743178HRR743178_f1.fq.gz (1.44 GB)HRX536990HepG2 Ctrlsh2Illumina NovaSeq 6000HRS438225 (SAMC2300478)
HRR743178HRR743178_r2.fq.gz (1.47 GB)HRX536990HepG2 Ctrlsh2Illumina NovaSeq 6000HRS438225 (SAMC2300478)
HRR743179HRR743179_f1.fq.gz (1.63 GB)HRX536991HepG2 Ctrlsh3Illumina NovaSeq 6000HRS438226 (SAMC2300482)
HRR743179HRR743179_r2.fq.gz (1.71 GB)HRX536991HepG2 Ctrlsh3Illumina NovaSeq 6000HRS438226 (SAMC2300482)
HRR743180HRR743180_f1.fq.gz (1.84 GB)HRX536992HepG2 STAT3sh1Illumina NovaSeq 6000HRS438227 (SAMC2300487)
HRR743180HRR743180_r2.fq.gz (1.88 GB)HRX536992HepG2 STAT3sh1Illumina NovaSeq 6000HRS438227 (SAMC2300487)
HRR743181HRR743181_f1.fq.gz (1.44 GB)HRX536993HepG2 STAT3sh2Illumina NovaSeq 6000HRS438228 (SAMC2300491)
HRR743181HRR743181_r2.fq.gz (1.47 GB)HRX536993HepG2 STAT3sh2Illumina NovaSeq 6000HRS438228 (SAMC2300491)
Showing 1 to 10 of 12 rows rows per page
Submitter:   Deng Wensheng / dengwensheng@wust.edu.cn
Organization:   Wuhan University of Science and Technology
Submission date:   2022-08-30