Accession

PRJCA022413

Title

the raw data of herbal magnoliids Warburgia ugandensis and Saururus chinensis

Relevance

Medical

Data types

Whole genome sequencing
Genome sequencing and assembly
Raw sequence reads
Genome sequencing

Organisms

Saururus chinensis
Warburgia ugandensis

Description

We submitted the raw data of chromosomal version of the Warburgia ugandensis and Saururus chinensis. The chromosome-level genomes of W. ugandensis and S. chinensis will be valuable resources for understanding the genetics of these medicinal plants, studying the evolution of magnoliids and angiosperms and conserving plant genetic resources.

Sample scope

Multispecies

Release date

2023-12-27

Publication

PubMed ID	Article title	Journal name	DOI	Year
38816414	The chromosome-level genomes of the herbal magnoliids Warburgia ugandensis and Saururus chinensis	Scientific Data	10.1038/s41597-024-03229-9	2024

Grants

Agency	program	Grant ID	Grant title
National Natural Science Foundation of China (NSFC)		32000171

Submitter

Liuming Luo (luoliuming@genomics.cn)

Organization

BGI Research Institute

Submission date

2023-12-27

Project Data

Resource name	Description
BioSample (36) show	-
SAMC3280037	RNA-seq of Warburgia ugandensis:leaf
SAMC3280036	RNA-seq of Warburgia ugandensis:leaf
SAMC3280035	RNA-seq of Warburgia ugandensis:leaf
SAMC3280034	WGS sequencing of Warburgia ugandensis:leaf
SAMC3280033	Hi-C sequencing of Warburgia ugandensis:leaf
SAMC3280032	Nanopore sequencing of Warburgia ugandensis:leaf
SAMC3280031	RNA-seq of Saururus chinensis:rhizome
SAMC3280030	RNA-seq of Saururus chinensis:rhizome
SAMC3280029	RNA-seq of Saururus chinensis:rhizome
SAMC3280028	RNA-seq of Saururus chinensis:root
SAMC3280027	RNA-seq of Saururus chinensis:root
SAMC3280026	RNA-seq of Saururus chinensis:root
SAMC3280025	RNA-seq of Saururus chinensis:oldflower
SAMC3280024	RNA-seq of Saururus chinensis:oldflower
SAMC3280023	RNA-seq of Saururus chinensis:oldflower
SAMC3280022	RNA-seq of Saururus chinensis:full_blossom_flower
SAMC3280021	RNA-seq of Saururus chinensis:full_blossom_flower
SAMC3280020	RNA-seq of Saururus chinensis:full_blossom_flower
SAMC3280019	RNA-seq of Saururus chinensis:youngflower
SAMC3280018	RNA-seq of Saururus chinensis:youngflower
SAMC3280017	RNA-seq of Saururus chinensis:youngflower
SAMC3280016	RNA-seq of Saururus chinensis:youngleaf
SAMC3280015	RNA-seq of Saururus chinensis:youngleaf
SAMC3280014	RNA-seq of Saururus chinensis:youngleaf
SAMC3280013	RNA -seq of Saururus chinensis:matureleaf
SAMC3280012	RNA-seq of Saururus chinensis:matureleaf
SAMC3280011	RNA seq of Saururus chinensis:matureleaf
SAMC3280010	RNA-seq of Saururus chinensis:upperstem
SAMC3280009	RNA-seq of Saururus chinensis:upperstem
SAMC3280008	RNA-seq of Saururus chinensis:upperstem
SAMC3280007	RNA-seq of Saururus chinensis:lowerstem
SAMC3280006	RNA-seq of Saururus chinensis:lowerstem
SAMC3280005	RNA-seq of Saururus chinensis:lowerstem
SAMC3280004	WGS sequencing of Saururus_chinensis:leaf
SAMC3280003	Hi-C sequencing of Saururus_chinensis:lesf
SAMC3280002	Nanopore sequencing of Saururus_chinensis:leaf
GSA (1)	-
CRA014162	The raw sequensing data of herbal magnoliids Warburgia ugandensis and Saururus chinensis