Accession | PRJCA000181 |
---|---|
Title | Resequencing and genotyping of rice landrace |
Umbrella project |
MMDB: Molecular Module-based Designer Breeding Systems XDA08020000: Analysis of module systems and their coupling effects XDA08020100: High-throughput analysis of molecular module systems XDA08020101: Analysis of molecular module systems for complex traits in rice |
Data types | Whole genome sequencing |
Organisms | Oryza sativa |
Description | Here sequenced and genotyped diverse sample of 950 worldwide rice varieties, including the Oryza sativa indica and Oryza sativa japonica subspecies, to perform GWAS. We identified a total of new loci associated with flowering time and with ten grain-related traits, indicating that the larger sample increased the power to detect trait-associated variants using GWAS. With these data, we analyzed the molecular module systems for complex traits in rice. |
Sample scope | Multiisolate |
Release date | 2020-12-31 |
Submitter | Bin Han (bhan@ncgr.ac.cn) |
Organization | Shanghai Institutes for Biological Sciences |
Submission date | 2016-02-19 |
Resource name (Count) | File Size (MB) |
BioSample (979) | - |
GSA (1) | - |
CRA000065 | 289,962.41 |