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    • Sample ID Gene Symbol Glioma Grade Chr Start Site End Site RET ALT Amino Acid Change Effect Filter DNA VAF
    TCGA-DB-A4XG-01A EML4 LGG chr2 42326190 42326190 G T p.R760L missense_variant PASS 0.185714286
    TCGA-DB-A4XG-01A TNS1 LGG chr2 217848183 217848194 CTGCTGCTGCCA - p.W650_Q653del inframe_deletion PASS 0.341463415
    TCGA-DB-A4XG-01A FGD5 LGG chr3 14880615 14880615 T C p.L901P missense_variant PASS 0.492753623
    TCGA-DB-A4XG-01A NIPBL LGG chr5 37022097 37022097 C A p.A1792D missense_variant PASS 0.270833333
    TCGA-DB-A4XG-01A SIM1 LGG chr6 100420939 100420939 G A p.L340L synonymous_variant PASS 0.34375
    TCGA-DB-A4XG-01A ANKIB1 LGG chr7 92352583 92352583 C T p.L446L synonymous_variant PASS 0.463022508
    TCGA-DB-A4XG-01A ZCWPW1 LGG chr7 100417148 100417150 AAG - p.S132del inframe_deletion PASS 0.195652174
    TCGA-DB-A4XG-01A MATN2 LGG chr8 98033598 98033598 T G p.C918W missense_variant PASS 0.470588235
    TCGA-DB-A4XG-01A CCN4 LGG chr8 133213070 133213070 C T p.I92I synonymous_variant PASS 0.388888889
    TCGA-DB-A4XG-01A CDK5RAP2 LGG chr9 120579940 120579940 A G p.P13P synonymous_variant PASS 0.258064516