DogGD
Toggle navigation
Home
Genome
Dog
Dhole
Gray wolf
Gene
Variome
78 Samples Variation
127 Samples Variation
722 Samples Variation
27 Ancient Samples Variation
Variation search
Variation compared
Genome Browse
Transcriptome
Expression in Disease
Expression in Cell Line
Expression in Normal Tissues
Genes
Curated lncRNA
Known lncRNA
Preditectd Novel lncRNA
Single Cell
Single Cell Cluster
Gene marker explore
Gene insitu map
Phenotype
Dog Breed
Dog Disease
Genotype-Phenotype pairs (G2P)
Dog-Human Disease
Tools
Genome Search
Breed Search
Disease Search
Gene Expression
Gene Ontology
Dog Visual Classification
Literature
Download
Genome data
SNP data
Expression data
Documents
Tutorial
iDog Breeds Nomeclature
Gene Query
Genome Database
SNP Database
Phenotype Database
Expression Database
Online Tools
FAQ
iDog
DogGD
Blast
blastn
blastp
blastx
tblastn
Dog Genome Database
BLAST translated nucleotide to Protein(blastx)
Database:
Dhole(pep)
Wolf(pep)
Input:
CCCGCATCTGGGAGGACGAGCCCTAAGGTTACCGTGTTCAATTCAAGGGAGTCAGACTGGCTTTCCCCTGAGAACAGACCTCCTGTTTCCTCTGTCACTTCGCTGCCTCCTTAGACTGTCGTGTGCAGAGACGTGCCGTCTGGTCGCAGGGAGGGGTCTGTTGGCAAGCAGCGGTAGACACCTGGTTCCTCGTACTCCAG
Or load it from disk
Set subsequence:
From
to
General Parameters
Max target sequences
10
50
100
250
500
1000
5000
10000
20000
Expect threshold:
Word size:
2
3
6
Matrix:
PAM30
PAM70
PAM250
BLOSUM80
BLOSUM62
BLOSUM45
BLOSUM50
BLOSUM90
Run Blastx
Reset
