e.g., HRA000087; HRA000150
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HRA001143
   HRA001143.xlsx
Title:
The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
Release date:
2021-08-26
Description:
We applied whole-exome sequencing, EBV genome sequencing and whole-genome bisulfite sequencing to multiple samples derived from the same patient, which covered different histological stages from morphologically normal epithelial tissues to dysplasia and EBVaGCs.
Data Accessibility:   
Controlled access Request Data
BioProject:
PRJCA006093
Study type:
Disease Study
Disease name:
gastric adenocarcinoma
Data Access Committee

For each controlled access study, there is a corresponding Data Access Committee(DAC) to determine the access permissions. Access to actual data files is not managed by NGDC.


DAC NO.:
HDAC000044
DAC name:
EBV-associated cancers
Contact person:
Bai Fan
Email:
fbai@pku.edu.cn
Description:
This project includes scRNA-seq, WGS and bulk RNA-seq data for NPC and Exon-seq, WGBS, EBV tageted-seq for EBV+GC
Individuals & samples
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
Individual Accession
Individual Name
Gender
Sample Accession
Sample Name
Sample Description
HRI138503P10maleHRS267534P10-BThe genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267535P10-C1The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267536P10-C2The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267537P10-C3The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267538P10-HDThe genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267539P10-LD1The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267540P10-LD2The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138503P10maleHRS267541P10-NThe genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138504P11maleHRS267542P11-BThe genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
HRI138504P11maleHRS267543P11-C1The genomic architecture of EBV and its infected gastric tissue from precursor lesions to carcinoma
Showing 1 to 10 of 143 rows rows per page
Files
Request Data
Run accession
Files
Experiment
Experiment title
Platform
Sample
Run accession
Files
Experiment
Experiment title
Platform
Sample
HRR339285HRR339285_f1.fastq.gz (2.73 GB)HRX291286P10-BIllumina HiSeq X TenHRS267534 (SAMC1859913)
HRR339285HRR339285_f1.fastq.gz (3.30 GB)HRX291286P10-BIllumina HiSeq X TenHRS267534 (SAMC1859913)
HRR339286HRR339286_f1.fastq.gz (4.58 GB)HRX291287P10-C1Illumina HiSeq X TenHRS267535 (SAMC1859917)
HRR339286HRR339286_f1.fastq.gz (5.26 GB)HRX291287P10-C1Illumina HiSeq X TenHRS267535 (SAMC1859917)
HRR339287HRR339287_f1.fastq.gz (4.73 GB)HRX291288P10-C2Illumina HiSeq X TenHRS267536 (SAMC1859920)
HRR339287HRR339287_f1.fastq.gz (5.40 GB)HRX291288P10-C2Illumina HiSeq X TenHRS267536 (SAMC1859920)
HRR339288HRR339288_f1.fastq.gz (5.65 GB)HRX291289P10-C3Illumina HiSeq X TenHRS267537 (SAMC1859924)
HRR339288HRR339288_f1.fastq.gz (6.59 GB)HRX291289P10-C3Illumina HiSeq X TenHRS267537 (SAMC1859924)
HRR339289HRR339289_f1.fastq.gz (4.78 GB)HRX291290P10-HDIllumina HiSeq X TenHRS267538 (SAMC1859928)
HRR339289HRR339289_f1.fastq.gz (5.61 GB)HRX291290P10-HDIllumina HiSeq X TenHRS267538 (SAMC1859928)
Showing 1 to 10 of 438 rows rows per page
Submitter:   Bai Fan / fbai@pku.edu.cn
Organization:   Peking University
Submission date:   2021-08-09
Requests:   6