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Experiment information
Accession CRX1525584
Organism soil metagenome
Title JL234B.2
BioProject PRJCA035994
BioSample SAMC4767555
Platform Illumina NovaSeq 6000
Library
Library name Construction protocol Strategy Source Selection Layout
DNA purity and integrity were analyzed using agarose gel electrophoresis. The DNA concentration was precisely quantified using a Qubit instrument. Qualified DNA samples were randomly fragmented into approximately 350 bp fragments using a Covaris ultrasonicator. Subsequently, the fragmented DNA underwent end repair, A-tailing, sequencing adapter ligation, purification, and PCR amplification to complete the library preparation. Following library construction, initial quantification was performed using a Qubit 2.0, and the library was diluted to a concentration of 2 ng/μl. The insert size of the library was then determined using an Agilent 2100, and once it met the expected size range, the library’s effective concentration was accurately quantified using Q-PCR (library effective concentration > 3 nM). After passing library quality control, different libraries were pooled based on their effective concentrations and the desired data output for Illumina PE150 sequencing. AMPLICON METAGENOMIC PCR PAIRED
Processing Planned read length (bp) for mate 1: 150
Planned read length (bp) for mate 2: 150
Release date2025-02-23
Run
Run accession Run data file information
File nameFile size (MB)
CRR1648169 CRR1648169_r1.fastq.gz
CRR1648169_r2.fastq.gz
3.54
3.24
SubmitterShenghao Liu (shliu@fio.org.cn)
OrganizationFirst Institute of Oceanography, Ministry of Natural Resources
Date submitted2025-02-20