- Scientific Name
- Rattus tanezumi
- Common Names
- Tanezumi rat; Oriental house rat; Rattus brunneusculus
- Bioproject
- PRJCA003057
- Biosample
- SAMC199960
- Accession No.
- GWHAOJD00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- The State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences
- Contact
- Yi Chen, chenyi@ioz.ac.cn
- Sequence author(s)
- Yi Chen
- Released Date
- 2022-07-15
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Supernova v.2.0.1
- Sequencing & coverage
- Illumina HiSeq X Ten 99.2
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAOJD00000000 | - | AHR_1.0 | Draft genome in scaffold level | 2022-07-15 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,513,004,267 |
| GC content | 42.14% |
| Scaffold sequence No. | 40,616 |
| Maximum scaffold sequence length (bp) | 82,670,372 |
| Minimum scaffold sequence length (bp) | 640 |
| Average scaffold sequence length (bp) | 61,872 |
| Scaffold N50 (bp) | 17,909,560 |
| Scaffold N90 (bp) | 1,260,050 |