- Scientific Name
- Saccharum hybrid cultivar
- Common Names
- sugarcane; Saccharum hybrid cultivar (unknown)
- Bioproject
- PRJCA045391
- Biosample
- SAMC5813343
- Accession No.
- GWHGPWU00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Contact
- Xingtan Zhang, zhangxingtan@caas.cn
- Sequence author(s)
- Xingtan Zhang
- Released Date
- 2025-02-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19.1
CPhasing v0.2.6 - Sequencing & coverage
- PacBio Sequel 40.6
Oxford Nanopore Ultra-long 20.8
Pore-C 51.7 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHGPWU00000000.1 | - | Sh_POJ2878 | Draft genome in chromosome level | 2025-09-02 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 10,373,439,300 |
| GC content | 44.75% |
| Chromosomes sequence No. | 118 |
| Genome sequence No. | 5,788 |
| Maximum genome sequence length (bp) | 131,706,134 |
| Minimum genome sequence length (bp) | 1,136 |
| Average genome sequence length (bp) | 1,792,232 |
| Genome sequence N50 (bp) | 86,642,320 |
| Genome sequence N90 (bp) | 63,733,417 |