Scientific Name
Carica papaya
Common Names
mamon; papaya;
Bioproject
PRJCA046462
Biosample
SAMC5911493
Accession No.
GWHGQJA00000000.1
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
Center for Genomics and Biotechnology, Fujian Agriculture and Forestry University
Contact
Yihan Tong, t13476018526@gmail.com
Sequence author(s)
Yihan Tong
Released Date
2025-09-20
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
hifiasm WGS of SVP-55
Sequencing & coverage
Pacbio 40
Download
DNA GFF RNA CDS Protein
Publication(s)
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Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHGQJA00000000.1 - SVP_55 Draft genome in chromosome level 2025-09-20 DNA GFF RNA CDS Protein

Statistics of Genome Assembly

Genome size (bp) 328,067,302
GC content 35.58%
Chromosomes sequence No. 9
Genome sequence No. 12
Maximum genome sequence length (bp) 48,438,140
Minimum genome sequence length (bp) 45,674
Average genome sequence length (bp) 27,338,942
Genome sequence N50 (bp) 36,774,335
Genome sequence N90 (bp) 30,995,800
Annotation of Whole Genome Assembly
Protein Total
Chromosome 22,370 22,370
Total 22,370 22,370
Annotation Details
ChrID Protein Total
chr1 2,802 2,802
chr2 2,782 2,782
chr3 2,643 2,643
chr4 2,586 2,586
chr5 2,476 2,476
chr6 2,470 2,470
chr7 2,276 2,276
chr8 2,242 2,242
chr9 2,093 2,093
Total 22,370 22,370