- Scientific Name
- Brassica rapa subsp. chinensis
- Common Names
- bok-choy; Brassica campestris subsp. chinensis (L.) Makino, 1912, Brassica campestris subsp. chinensis var. communis, Brassica chinensis, Brassica chinensis var. communis, Brassica oleracea var. chinensis, Brassica rapa (Chinensis Group), Brassica rapa Pak Choi Group, Brassica rapa subsp. chinensis var. communis, Brassica rapa var. amplexicaulis, Brassica rapa var. chinensis, Brassica rapa var. communis, Brassica rapa var. utilis M.Tsen & S.H.Lee, Brassica rapa var. utilis
- Bioproject
- PRJCA047867
- Biosample
- SAMC5980251
- Accession No.
- GWHGSDT00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Shandong Laboratory of Advanced Agricultural Sciences in Weifang, Peking University Institute of Advanced Agricultural Sciences
- Contact
- Weikai Chen(weikai.chen@pku-iaas.edu.cn)
- Sequence author(s)
- Weikai Chen
- Released Date
- 2025-10-16
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm 0.19.5
- Sequencing & coverage
- PacBio HiFi 60.0
ONT 40.0
Hi-C 100.0 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- W Chen, et al. Pan-centromere landscape and dynamic evolution in Brassica plants.. Nature plants. 2025.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHGSDT00000000.1 | - | A3_JMC | Draft genome in chromosome level | 2025-10-16 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 445,543,150 |
| GC content | 37.88% |
| Genome sequence No. | 10 |
| Maximum genome sequence length (bp) | 70,420,520 |
| Minimum genome sequence length (bp) | 29,184,868 |
| Average genome sequence length (bp) | 44,554,315 |
| Genome sequence N50 (bp) | 46,557,253 |
| Genome sequence N90 (bp) | 32,129,535 |