- Scientific Name
- Avena brevis
- Common Names
- -
- Bioproject
- PRJCA003205
- Biosample
- SAMC204691
- Accession No.
- GWHAOPA01000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR175337
- GVM variations of the species
- -
- Submitter Organization
- South China Botanical Garden, Chinese Academy of Sciences, South China Botanical Garden
- Contact
- Qing Liu, liuqing@scib.ac.cn
- Sequence author(s)
- Qing Liu
- Released Date
- 2020-08-11
- Assembly Level
- Complete genome
- Genome Representation
- Partial Genome ( Chloroplast )
- Assembly method
- NOVOPlasty v.2.6.2
- Sequencing & coverage
- Illumina Miseq 1000
- Download
- DNA CDS
- Publication(s)
- Qing Liu, et al. Comparative chloroplast genome analyses of Avena: insights into evolutionary dynamics and phylogeny. BMC Plant Biology. 2020, 20: 406.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAOPA01000000 | - | Avena_brevis_289 | Complete genome | 2020-08-11 |
DNA
CDS
|
Statistics of Genome Assembly
| Genome size (bp) | 135,889 |
| GC content | 38.51% |
| Organellas sequence No. | 1 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Others | Total | |
|---|---|---|---|---|---|
| Total | 2,654 | 61 | 19 | 1 | 2,735 |