- Scientific Name
- Populus alba var. pyramidalis
- Common Names
- Populus bolleana
- Bioproject
- PRJCA002423
- Biosample
- SAMC150314
- Accession No.
- GWHACDA00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Computer Science, Sichuan University
- Contact
- jingtian Zhao, jingtianzhao@stu.scu.edu.cn
- Sequence author(s)
- jingtian Zhao
- Released Date
- 2020-03-24
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- FALCON 2017-12
- Sequencing & coverage
- PacBio 126.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Le Zhang, et al. Bioinformatic analysis of chromatin organization and biased expression of duplicated genes between two poplars with a common whole-genome duplication. Horticulture Research. 2021, 8(1): 62.
Statistics of Genome Assembly
| Genome size (bp) | 408,078,299 |
| GC content | 33.56% |
| Genome sequence No. | 131 |
| Maximum genome sequence length (bp) | 55,182,029 |
| Minimum genome sequence length (bp) | 22,753 |
| Average genome sequence length (bp) | 3,115,102 |
| Genome sequence N50 (bp) | 19,200,681 |
| Genome sequence N90 (bp) | 13,680,559 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 40,214 | 40,214 |