- Scientific Name
- Cleistogenes songorica
- Common Names
- Kengia songorica
- Bioproject
- PRJCA002752
- Biosample
- SAMC188012
- Accession No.
- GWHANUQ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- The State Key Laboratory of Grassland Agro-ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University
- Contact
- Jiyu Zhang(zhangjy@lzu.edu.cn)
- Sequence author(s)
- Jiyu Zhang
- Released Date
- 2020-11-26
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- GS De Novo Assembler v1.01
- Sequencing & coverage
- PacBio 316.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Qi Yan, et al. Integrated analysis of co-expression, conserved genes and gene families reveal core regulatory network of heat stress response in Cleistogenes songorica, a xerophyte perennial desert plant. BMC Genomics. 2020, 21(1): 715.
Statistics of Genome Assembly
| Genome size (bp) | 540,115,686 |
| GC content | 45.01% |
| Genome sequence No. | 103 |
| Maximum genome sequence length (bp) | 38,883,845 |
| Minimum genome sequence length (bp) | 44,100 |
| Average genome sequence length (bp) | 5,243,842 |
| Genome sequence N50 (bp) | 28,480,272 |
| Genome sequence N90 (bp) | 19,463,092 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 55,440 | 55,440 |