- Scientific Name
- Gastrodia elata
- Common Names
- -
- Bioproject
- PRJCA003518
- Biosample
- SAMC248304
- Accession No.
- GWHAOSR00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Life Science, Kaili University
- Contact
- Yunsheng Wang(wys3266@126.com)
- Sequence author(s)
- Yunsheng Wang
- Released Date
- 2022-12-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- Mecat2 2019-12
- Sequencing & coverage
- PacBio 99.98
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Yunsheng Wang, et al. Genome sequencing and resequencing identified three horizontal gene transfers anduncovered the genetic mechanism on the intraspecies adaptive evolution ofGastrodia elata Blume. Frontiers in Plant Science. 2023, 13.
Statistics of Genome Assembly
| Genome size (bp) | 1,036,918,901 |
| GC content | 34.29% |
| Genome sequence No. | 475 |
| Maximum genome sequence length (bp) | 133,096,707 |
| Minimum genome sequence length (bp) | 926 |
| Average genome sequence length (bp) | 2,182,987 |
| Genome sequence N50 (bp) | 51,201,707 |
| Genome sequence N90 (bp) | 36,291,072 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 26,453 | 26,453 |