- Scientific Name
- Scutellaria baicalensis
- Common Names
- Baikal skullcap;
- Bioproject
- PRJCA001525
- Biosample
- SAMC071682
- Accession No.
- GWHAOTO00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- -, Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences
- Contact
- Zhichao Xu, zcxu@implad.ac.cn
- Sequence author(s)
- Zhichao Xu
- Released Date
- 2020-10-26
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- CANU 2
- Sequencing & coverage
- Oxford nanopore technologies 100.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Zhichao Xu, et al. Comparative Genome Analysis of Scutellaria baicalensis and Scutellaria barbata Reveals the Evolution of Active Flavonoid Biosynthesis. Genomics, Proteomics & Bioinformatics. 2020.
Statistics of Genome Assembly
| Genome size (bp) | 377,004,575 |
| GC content | 34.17% |
| Genome sequence No. | 122 |
| Maximum genome sequence length (bp) | 69,569,111 |
| Minimum genome sequence length (bp) | 26,388 |
| Average genome sequence length (bp) | 3,090,201 |
| Genome sequence N50 (bp) | 40,790,749 |
| Genome sequence N90 (bp) | 26,229,543 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 30,313 | 30,313 |