- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJCA030093
- Biosample
- SAMC6212596
- Accession No.
- GWHHIWX00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 26,938,825 (SNP), 3,724,480 (Indel)
- Submitter Organization
- Genomics and Synthetic Biology of Horticultural Crops, Institute of Advanced Agricultural Sciences, Peking University
- Contact
- shaoying chen, shaoyingchen1999@163.com
- Sequence author(s)
- chunmei shi
- Released Date
- 2025-12-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.19.7
- Sequencing & coverage
- PacBio 100
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHHIWX00000000.1 | - | SL6.0_genome | Draft genome in chromosome level | 2025-12-17 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 809,768,367 |
| GC content | 34.79% |
| Genome sequence No. | 12 |
| Maximum genome sequence length (bp) | 93,972,077 |
| Minimum genome sequence length (bp) | 52,557,640 |
| Average genome sequence length (bp) | 67,480,697 |
| Genome sequence N50 (bp) | 68,472,966 |
| Genome sequence N90 (bp) | 55,854,373 |