- Scientific Name
- Solanum habrochaites
- Common Names
- Lycopersicon hirsutum f. glabratum, Lycopersicon hirsutum
- Bioproject
- PRJCA030093
- Biosample
- SAMC6212588
- Accession No.
- GWHHIXF00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Genomics and Synthetic Biology of Horticultural Crops, Institute of Advanced Agricultural Sciences, Peking University
- Contact
- shaoying chen(shaoyingchen1999@163.com), jingxuan wang(wjxlyx@126.com)
- Sequence author(s)
- chunmei shi
- Released Date
- 2025-12-17
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.19.7
- Sequencing & coverage
- PacBio 100
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHHIXF00000000.1 | - | LA1777_genome | Draft genome in chromosome level | 2025-12-17 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 975,239,484 |
| GC content | 34.79% |
| Genome sequence No. | 12 |
| Maximum genome sequence length (bp) | 120,243,252 |
| Minimum genome sequence length (bp) | 64,793,227 |
| Average genome sequence length (bp) | 81,269,957 |
| Genome sequence N50 (bp) | 79,814,198 |
| Genome sequence N90 (bp) | 68,556,035 |