- Scientific Name
- Cladopus chinensis
- Common Names
- -
- Bioproject
- PRJCA002047
- Biosample
- SAMC124641
- Accession No.
- GWHACFD00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR103268
- GVM variations of the species
- -
- Submitter Organization
- Fujian Normal University, Fujian Normal University
- Contact
- Ting Xue, xueting@fjnu.edu.cn
- Sequence author(s)
- Ting Xue
- Released Date
- 2020-04-13
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Canu 1.6
- Sequencing & coverage
- PacBio 105.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Ting Xue. A high-quality genome provides insights into the new taxonomic status and genomic characteristics of Cladopus chinensis (Podostemaceae). Horticulture Research. 2020, 7: 46.
Statistics of Genome Assembly
| Genome size (bp) | 906,394,244 |
| GC content | 31.04% |
| Scaffold sequence No. | 6,361 |
| Maximum scaffold sequence length (bp) | 33,494,499 |
| Minimum scaffold sequence length (bp) | 1,022 |
| Average scaffold sequence length (bp) | 142,492 |
| Scaffold N50 (bp) | 21,225,508 |
| Scaffold N90 (bp) | 51,023 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 27,270 | 27,270 |