- Scientific Name
- Cyprinus carpio
- Common Names
- carp, fancy carp, koi, mirror carp; common carp;
- Bioproject
- PRJCA002174
- Biosample
- SAMC133519
- Accession No.
- GWHACFI00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR133810
- GVM variations of the species
- -
- Submitter Organization
- -, Chinese Academy of Fishery Sciences
- Contact
- Jiong-Tang Li(lijt@cafs.ac.cn)
- Sequence author(s)
- Jiong-Tang Li
- Released Date
- 2021-02-23
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg 2
quickmerge 1 - Sequencing & coverage
- PacBio 18.5
Nanopore 7.3
Illumina HiSeq 4000 159 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHACFI00000000 | - | Cyprinus carpio genome assembly | Draft genome in chromosome level | 2021-02-23 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,681,322,320 |
| GC content | 37.11% |
| Genome sequence No. | 6,714 |
| Maximum genome sequence length (bp) | 48,440,497 |
| Minimum genome sequence length (bp) | 224 |
| Average genome sequence length (bp) | 250,420 |
| Genome sequence N50 (bp) | 29,545,498 |
| Genome sequence N90 (bp) | 20,763,677 |