- Scientific Name
- Platycodon grandiflorus
- Common Names
- balloon-flower, Chinese-bellflower, jie geng; Platycodon grandiflorum
- Bioproject
- PRJCA003843
- Biosample
- SAMC268341
- Accession No.
- GWHARYT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Faculty of Electronic and Information Engineering, Xi'an Jiaotong University
- Contact
- Bo Wang, wangboxjtu@xjtu.edu.cn
- Sequence author(s)
- Bo Wang
- Released Date
- 2021-11-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 1.0
- Sequencing & coverage
- ONT 91.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHARYT00000000 | - | JG | Draft genome in chromosome level | 2021-11-08 |
DNA
GFF
RNA
CDS
Protein
|
| GWHARYT00000000.1 | - | JG | Draft genome in chromosome level | 2022-02-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 616,484,004 |
| GC content | 36.90% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 1,544 |
| Maximum genome sequence length (bp) | 103,308,309 |
| Minimum genome sequence length (bp) | 2,057 |
| Average genome sequence length (bp) | 399,277 |
| Genome sequence N50 (bp) | 66,886,967 |
| Genome sequence N90 (bp) | 29,628,164 |
Annotation of Whole Genome Assembly
| Protein | Others | Total | |
|---|---|---|---|
| Chromosome | 21,331 | 21,331 | 42,662 |
| Others | 288 | 288 | 576 |
| Total | 21,619 | 21,619 | 43,238 |
Annotation Details
| ChrID | Protein | Others | Total |
|---|---|---|---|
| chr1 | 3,387 | 3,387 | 6,774 |
| chr2 | 3,348 | 3,348 | 6,696 |
| chr3 | 2,657 | 2,657 | 5,314 |
| chr4 | 2,666 | 2,666 | 5,332 |
| chr5 | 2,405 | 2,405 | 4,810 |
| chr6 | 2,352 | 2,352 | 4,704 |
| chr7 | 1,692 | 1,692 | 3,384 |
| chr8 | 1,963 | 1,963 | 3,926 |
| chr9 | 861 | 861 | 1,722 |
| Others | 288 | 288 | 576 |
| Total | 21,619 | 21,619 | 43,238 |