- Scientific Name
- viral metagenome
- Common Names
- -
- Bioproject
- PRJCA003892
- Biosample
- SAMC273019
- Accession No.
- GWHASIT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Laboratory of Biofuels, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences
- Contact
- Jiulong Zhao, zhaojl@qibebt.ac.cn
- Sequence author(s)
- Jiulong Zhao
- Released Date
- 2021-12-10
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome
- Assembly method
- SPAdes v3.13.1
- Sequencing & coverage
- Illumina HiSeq X Ten 100.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Jiulong Zhao, et al. Novel Viral Communities Potentially Assisting in Carbon, Nitrogen, and SulfurMetabolism in the Upper Slope Sediments of Mariana Trench. mSystems. 2022, 7(1).
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHASIT00000000 | - | MTS-VSs | Draft genome in scaffold level | 2021-12-10 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 39,786,094 |
| GC content | 50.01% |
| Scaffold sequence No. | 3,206 |
| Maximum scaffold sequence length (bp) | 217,265 |
| Minimum scaffold sequence length (bp) | 5,000 |
| Average scaffold sequence length (bp) | 12,410 |
| Scaffold N50 (bp) | 15,668 |
| Scaffold N90 (bp) | 5,726 |