Scientific Name
Gastrodia elata
Common Names
-
Bioproject
PRJCA000931
Biosample
SAMC044637
Accession No.
GWHAAEX00000000
GSA raw reads
CRR032179, CRR032182, CRR032181, CRR032180
GVM variations
-
Submitter Organization
National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences
Contact
Yuan Yuan, y_yuan0732@163.com
Sequence author(s)
Yuan Yuan
Released Date
2018-08-16
Assembly Level
Draft genome in scaffold level
Genome Representation
Full Genome
Assembly method
AllPaths 44080
Sequencing & coverage
Illumina HiSeq 2500 150.0
Download
DNA GFF RNA Protein
Publication(s)
Yuan Yuan, et al. The Gastrodia elata genome provides insights into plant adaptation to heterotrophy. Nature Communications. 2018, 9(1): 1615.
Assembly Accession Assembly Name Assembly Level Release Date Download Files
GWHAAEX00000000 G.elata-2017 Draft genome in scaffold level 2018-08-16 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 1,061,091,640
GC content 34.52%
Scaffold sequence No. 3,779
Maximum scaffold sequence length (bp) 24,690,109
Minimum scaffold sequence length (bp) 892
Average scaffold sequence length (bp) 280,786
Scaffold N50 (bp) 4,911,943
Scaffold N90 (bp) 1,349,508
Annotation of Whole Genome Assembly
Protein Total
Total 18,969 18,969