- Scientific Name
- Panicum miliaceum
- Common Names
- broom millet, common millet, proso millet;
- Bioproject
- PRJCA000965
- Biosample
- SAMC044602
- Accession No.
- GWHAAEZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 5,603,840 (SNP), 0 (Indel)
- Submitter Organization
- Department of Plant Genetics and Breeding, China Agricultural University
- Contact
- Junpeng Shi(shijunpeng@cau.edu.cn)
- Sequence author(s)
- Junpeng Shi
- Released Date
- 2018-09-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- Falcon Falcon (v1.8.7)
- Sequencing & coverage
- PacBio 170.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Junpeng Shi, et al. Chromosome conformation capture resolved near complete genome assembly of broomcorn millet. Nature Communications. 2019, 10(1):464.
Statistics of Genome Assembly
| Genome size (bp) | 848,436,801 |
| GC content | 46.80% |
| Genome sequence No. | 475 |
| Maximum genome sequence length (bp) | 69,183,459 |
| Minimum genome sequence length (bp) | 622 |
| Average genome sequence length (bp) | 1,786,183 |
| Genome sequence N50 (bp) | 48,259,421 |
| Genome sequence N90 (bp) | 33,613,985 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 86,387 | 86,387 |