Genome Warehouse

Scientific Name: Papaver somniferum
Common Names: opium poppy;
Bioproject: PRJCA001100
Biosample: SAMC047591
Accession No.: GWHAAFE00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: School of Electronic and Information Engineering, Xi'an Jiaotong University
Contact: Kai Ye(kaiye@xjtu.edu.cn), Ian Graham(ian.graham@york.ac.uk), Li Guo(guo_li@mail.xjtu.edu.cn), Xiaofei Yang(xfyang@xjtu.edu.cn), Thilo Winzer(thilo.winzer@york.ac.uk), Yi Li(yi.li@york.ac.uk), Zemin Ning(zn1@sanger.ac.uk), Zhesi He(zhesi.he@york.ac.uk), Roxana Teodor(roxana.teodor@york.ac.uk), Ying Lu(yinglu@shou.edu.cn), Tim Bowser(tim@bowsermail.com)
Sequence author(s): Kai Ye, Ian Graham, Li Guo, Xiaofei Yang, Thilo Winzer, Yi Li, Zemin Ning, Zhesi He, Roxana Teodor, Ying Lu, Tim Bowser
Released Date: 2018-10-30
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: Falcon 2017-09-01
DeNovoMAGIC 2017-06-01
ALLMAPS 2017-06-01
Sequencing & coverage: Illumina HiSeq 2500 120.0
Illumina HiSeq 4000 94.0
PacBio 68.0
Illumina HiSeqX 40.0
Download: DNA GFF RNA CDS Protein
Reannotation Download: -
Publication(s): Li Guo, et al. The opium poppy genome and morphinan production. Science. 2018, 362(6412): 343- 347.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAAFE00000000	-	Opium poppy (HN1)	Draft genome in chromosome level	2018-10-30	DNA GFF RNA CDS Protein

Genome size (bp)	2,715,382,726
GC content	37.28%
Chromosomes sequence No.	11
Genome sequence No.	34,388
Maximum genome sequence length (bp)	270,405,062
Minimum genome sequence length (bp)	252
Average genome sequence length (bp)	78,963
Genome sequence N50 (bp)	204,470,928
Genome sequence N90 (bp)	9,903,009

Annotation of Whole Genome Assembly

Annotation Details