- Scientific Name
- Oryza longistaminata
- Common Names
- long-staminate rice, red rice;
- Bioproject
- PRJCA000900
- Biosample
- SAMC042971
- Accession No.
- GWHAAGJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR043127
- GVM variations of the species
- -
- Submitter Organization
- College of Agriculture, South China Agricultural University
- Contact
- Wei Li(liweisdau@126.com), Lizhi Gao(Lgaogenomics@163.com)
- Sequence author(s)
- Wei Li, Lizhi Gao
- Released Date
- 2019-01-24
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- AllPaths 48894
- Sequencing & coverage
- Illumina HiSeq 2000 424.11
PacBio 18.57 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAAGJ00000000 | - | Oryza_longistaminata_v2.0 | Draft genome in scaffold level | 2019-01-24 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 363,521,819 |
| GC content | 41.90% |
| Scaffold sequence No. | 107 |
| Maximum scaffold sequence length (bp) | 17,842,742 |
| Minimum scaffold sequence length (bp) | 73,626 |
| Average scaffold sequence length (bp) | 3,397,400 |
| Scaffold N50 (bp) | 6,832,378 |
| Scaffold N90 (bp) | 1,809,380 |