- Scientific Name
- Papaver somniferum subsp. setigerum
- Common Names
- Papaver setigerum
- Bioproject
- PRJCA004217
- Biosample
- SAMC307770
- Accession No.
- GWHAZPH00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Faculty of Electronic and Information Engineering, , Xi'an Jiaotong University
- Contact
- Xiaofei Yang, xfyang@xjtu.edu.cn
- Sequence author(s)
- Xiaofei Yang, Kai Ye
- Released Date
- 2021-03-25
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- NextDenovo 2.2
3dDNA 180922 - Sequencing & coverage
- Oxford Nanopore 105.0
Illumina NoveSeq 71.0
Hi-C 143.0 - Download
-
DNA
- Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAZPH00000000 | - | P. setigerum genome and annotation | Draft genome in chromosome level | 2021-03-25 |
DNA
|
| GWHAZPH00000000.1 | - | Pse_HiFi_v2 | Draft genome in chromosome level | 2024-03-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 4,590,117,772 |
| GC content | 36.88% |
| Genome sequence No. | 381 |
| Maximum genome sequence length (bp) | 329,104,670 |
| Minimum genome sequence length (bp) | 3,460 |
| Average genome sequence length (bp) | 12,047,553 |
| Genome sequence N50 (bp) | 211,159,933 |
| Genome sequence N90 (bp) | 155,080,500 |