- Scientific Name
- Pyrus pyrifolia
- Common Names
- sha li; Ficus pyrifolia, Pyrus serotina
- Bioproject
- PRJCA004571
- Biosample
- SAMC342426
- Accession No.
- GWHBAOS00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Agriculture and Biotechnology, Zhejiang University
- Contact
- Songling Bai, songlingbai@zju.edu.cn
- Sequence author(s)
- Yuhao Gao, Qinsong Yang, Xinhui Yan, Xinyue Wu, Feng Yang, Jianzhao Li, Jia Wei, Junbei Ni, Mudassar Ahmad, Songling Bai, Yuanwen Teng
- Released Date
- 2021-05-16
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Canu v1.5
- Sequencing & coverage
- PacBio 124.6
Illumina NovaSeq 6000 73.5 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Jia Wei, et al. Early defoliation induces auxin redistribution, promoting paradormancy release inpear buds. Plant Physiology. 2022, 190(4): 2739-56.
Statistics of Genome Assembly
| Genome size (bp) | 541,340,367 |
| GC content | 37.36% |
| Genome sequence No. | 428 |
| Maximum genome sequence length (bp) | 45,424,325 |
| Minimum genome sequence length (bp) | 5,142 |
| Average genome sequence length (bp) | 1,264,814 |
| Genome sequence N50 (bp) | 27,968,327 |
| Genome sequence N90 (bp) | 25,623,545 |
Annotation of Whole Genome Assembly
| Protein | Others | Total | |
|---|---|---|---|
| Total | 42,559 | 63 | 42,622 |